Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.45□□□□□ -1.54
COPB1P53618 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 AL031584.1-201ENST00000447169 754 ntBASIC5.45□□□□□ -1.54
COPB1P53618 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 IGHV5-78-201ENST00000450948 295 ntBASIC5.45□□□□□ -1.54
COPB1P53618 AL122001.1-201ENST00000457027 370 ntBASIC5.45□□□□□ -1.54
COPB1P53618 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.45□□□□□ -1.54
COPB1P53618 RPS4XP1-201ENST00000482189 787 ntBASIC5.45□□□□□ -1.54
COPB1P53618 RN7SL30P-201ENST00000488416 306 ntBASIC5.45□□□□□ -1.54
COPB1P53618 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.45□□□□□ -1.54
COPB1P53618 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 AC026414.1-201ENST00000504046 698 ntBASIC5.45□□□□□ -1.54
COPB1P53618 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.45□□□□□ -1.54
COPB1P53618 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.45□□□□□ -1.54
COPB1P53618 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 AC068993.1-201ENST00000546724 589 ntBASIC5.45□□□□□ -1.54
COPB1P53618 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.45□□□□□ -1.54
COPB1P53618 FKBP1AP1-201ENST00000594588 318 ntBASIC5.45□□□□□ -1.54
COPB1P53618 AC013444.2-201ENST00000603317 787 ntBASIC5.45□□□□□ -1.54
COPB1P53618 AC067838.1-201ENST00000606064 577 ntBASIC5.45□□□□□ -1.54
COPB1P53618 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 AC021755.4-201ENST00000616620 456 ntBASIC5.45□□□□□ -1.54
COPB1P53618 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.45□□□□□ -1.54
COPB1P53618 AP003485.2-201ENST00000623636 610 ntBASIC5.45□□□□□ -1.54
COPB1P53618 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 CASC19-222ENST00000641321 1173 ntBASIC5.45□□□□□ -1.54
COPB1P53618 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 AC073429.2-201ENST00000569694 1444 ntBASIC5.45□□□□□ -1.54
COPB1P53618 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 SALL4P2-201ENST00000423288 2910 ntBASIC5.44□□□□□ -1.54
COPB1P53618 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COPB1P53618 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COPB1P53618 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.44□□□□□ -1.54
COPB1P53618 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.44□□□□□ -1.54
COPB1P53618 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.44□□□□□ -1.54
COPB1P53618 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COPB1P53618 AC008549.2-201ENST00000333482 706 ntBASIC5.44□□□□□ -1.54
COPB1P53618 SPTLC1P2-201ENST00000407089 121 ntBASIC5.44□□□□□ -1.54
COPB1P53618 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COPB1P53618 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.44□□□□□ -1.54
COPB1P53618 RPL22P18-201ENST00000417197 377 ntBASIC5.44□□□□□ -1.54
COPB1P53618 RPS26P13-201ENST00000419030 330 ntBASIC5.44□□□□□ -1.54
COPB1P53618 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.44□□□□□ -1.54
COPB1P53618 EIF4HP2-201ENST00000424380 563 ntBASIC5.44□□□□□ -1.54
COPB1P53618 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.44□□□□□ -1.54
COPB1P53618 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.44□□□□□ -1.54
COPB1P53618 AL354714.3-201ENST00000447284 493 ntBASIC5.44□□□□□ -1.54
COPB1P53618 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.44□□□□□ -1.54
COPB1P53618 RPL32P9-201ENST00000487963 407 ntBASIC5.44□□□□□ -1.54
COPB1P53618 AC020890.1-201ENST00000491837 504 ntBASIC5.44□□□□□ -1.54
COPB1P53618 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.44□□□□□ -1.54
COPB1P53618 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.44□□□□□ -1.54
COPB1P53618 AC093752.1-206ENST00000511823 336 ntBASIC5.44□□□□□ -1.54
COPB1P53618 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.44□□□□□ -1.54
COPB1P53618 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.44□□□□□ -1.54
COPB1P53618 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.44□□□□□ -1.54
COPB1P53618 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.44□□□□□ -1.54
COPB1P53618 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.44□□□□□ -1.54
COPB1P53618 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.44□□□□□ -1.54
COPB1P53618 AC009097.3-201ENST00000563557 1018 ntBASIC5.44□□□□□ -1.54
COPB1P53618 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.44□□□□□ -1.54
COPB1P53618 MIR1269B-201ENST00000580405 75 ntBASIC5.44□□□□□ -1.54
COPB1P53618 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.44□□□□□ -1.54
COPB1P53618 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.44□□□□□ -1.54
COPB1P53618 AC095055.1-201ENST00000603472 1113 ntBASIC5.44□□□□□ -1.54
COPB1P53618 SUMO2P14-201ENST00000604488 293 ntBASIC5.44□□□□□ -1.54
COPB1P53618 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.44□□□□□ -1.54
COPB1P53618 AC022079.2-201ENST00000619739 566 ntBASIC5.44□□□□□ -1.54
COPB1P53618 AC018445.2-201ENST00000622987 260 ntBASIC5.44□□□□□ -1.54
COPB1P53618 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.44□□□□□ -1.54
COPB1P53618 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
COPB1P53618 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.44□□□□□ -1.54
COPB1P53618 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COPB1P53618 AL590763.1-201ENST00000398297 1545 ntBASIC5.43□□□□□ -1.54
COPB1P53618 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.43□□□□□ -1.54
COPB1P53618 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COPB1P53618 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.43□□□□□ -1.54
COPB1P53618 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COPB1P53618 SNORA17.1-201ENST00000362945 126 ntBASIC5.43□□□□□ -1.54
COPB1P53618 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms