Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL035458.1-201ENST00000433096 585 ntBASIC6.73□□□□□ -1.33
USP11P51784 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.73□□□□□ -1.33
USP11P51784 RPS12P17-201ENST00000438591 377 ntBASIC6.73□□□□□ -1.33
USP11P51784 EIF5AP4-201ENST00000441206 465 ntBASIC6.73□□□□□ -1.33
USP11P51784 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.73□□□□□ -1.33
USP11P51784 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.73□□□□□ -1.33
USP11P51784 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.73□□□□□ -1.33
USP11P51784 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.73□□□□□ -1.33
USP11P51784 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.73□□□□□ -1.33
USP11P51784 AP000852.1-201ENST00000472460 573 ntBASIC6.73□□□□□ -1.33
USP11P51784 PFN1P6-201ENST00000476786 399 ntBASIC6.73□□□□□ -1.33
USP11P51784 AL358832.1-201ENST00000497800 389 ntBASIC6.73□□□□□ -1.33
USP11P51784 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.73□□□□□ -1.33
USP11P51784 RN7SKP298-201ENST00000515950 94 ntBASIC6.73□□□□□ -1.33
USP11P51784 RNA5SP271-201ENST00000516700 88 ntBASIC6.73□□□□□ -1.33
USP11P51784 RNU6-1153P-201ENST00000516760 105 ntBASIC6.73□□□□□ -1.33
USP11P51784 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.73□□□□□ -1.33
USP11P51784 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 AC044913.1-201ENST00000557200 430 ntBASIC6.73□□□□□ -1.33
USP11P51784 UBE2FP2-201ENST00000566646 462 ntBASIC6.73□□□□□ -1.33
USP11P51784 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
USP11P51784 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.73□□□□□ -1.33
USP11P51784 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.73□□□□□ -1.33
USP11P51784 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.73□□□□□ -1.33
USP11P51784 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.73□□□□□ -1.33
USP11P51784 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 BNIP3P9-201ENST00000603714 553 ntBASIC6.73□□□□□ -1.33
USP11P51784 AC104458.1-201ENST00000608243 463 ntBASIC6.73□□□□□ -1.33
USP11P51784 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.73□□□□□ -1.33
USP11P51784 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.73□□□□□ -1.33
USP11P51784 AC015722.2-201ENST00000622210 551 ntBASIC6.73□□□□□ -1.33
USP11P51784 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.73□□□□□ -1.33
USP11P51784 AC022400.9-201ENST00000623633 273 ntBASIC6.73□□□□□ -1.33
USP11P51784 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.73□□□□□ -1.33
USP11P51784 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 VN2R3P-201ENST00000422626 1412 ntBASIC6.73□□□□□ -1.33
USP11P51784 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.73□□□□□ -1.33
USP11P51784 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
USP11P51784 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USP11P51784 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 AL353743.4-201ENST00000422653 1547 ntBASIC6.72□□□□□ -1.33
USP11P51784 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.72□□□□□ -1.33
USP11P51784 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
USP11P51784 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 RNU1-150P-201ENST00000362491 162 ntBASIC6.72□□□□□ -1.33
USP11P51784 RN7SKP15-201ENST00000364742 309 ntBASIC6.72□□□□□ -1.33
USP11P51784 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 MIR323B-201ENST00000385269 82 ntBASIC6.72□□□□□ -1.33
USP11P51784 Y_RNA.582-201ENST00000391023 95 ntBASIC6.72□□□□□ -1.33
USP11P51784 CIR1P3-201ENST00000405137 479 ntBASIC6.72□□□□□ -1.33
USP11P51784 AL096800.1-201ENST00000405326 893 ntBASIC6.72□□□□□ -1.33
USP11P51784 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 RPS26P38-201ENST00000414476 348 ntBASIC6.72□□□□□ -1.33
USP11P51784 NANOGP4-201ENST00000427230 913 ntBASIC6.72□□□□□ -1.33
USP11P51784 NPM1P24-201ENST00000428039 894 ntBASIC6.72□□□□□ -1.33
USP11P51784 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.72□□□□□ -1.33
USP11P51784 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.72□□□□□ -1.33
USP11P51784 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.72□□□□□ -1.33
USP11P51784 MTATP6P30-201ENST00000443540 664 ntBASIC6.72□□□□□ -1.33
USP11P51784 Z99127.3-201ENST00000448158 395 ntBASIC6.72□□□□□ -1.33
USP11P51784 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 AC079776.3-201ENST00000450665 370 ntBASIC6.72□□□□□ -1.33
USP11P51784 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.72□□□□□ -1.33
USP11P51784 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 AC107398.1-201ENST00000486904 505 ntBASIC6.72□□□□□ -1.33
USP11P51784 NENFP3-201ENST00000503735 313 ntBASIC6.72□□□□□ -1.33
USP11P51784 IGBP1P5-201ENST00000507524 1000 ntBASIC6.72□□□□□ -1.33
USP11P51784 AC109445.1-201ENST00000512356 383 ntBASIC6.72□□□□□ -1.33
USP11P51784 RN7SKP288-201ENST00000516227 268 ntBASIC6.72□□□□□ -1.33
USP11P51784 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.72□□□□□ -1.33
USP11P51784 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.72□□□□□ -1.33
USP11P51784 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.72□□□□□ -1.33
USP11P51784 AC092747.2-201ENST00000545069 983 ntBASIC6.72□□□□□ -1.33
USP11P51784 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.72□□□□□ -1.33
USP11P51784 AC091078.2-201ENST00000557145 559 ntBASIC6.72□□□□□ -1.33
USP11P51784 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.72□□□□□ -1.33
USP11P51784 MIR4433B-201ENST00000581329 102 ntBASIC6.72□□□□□ -1.33
USP11P51784 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 AP001542.2-201ENST00000593141 364 ntBASIC6.72□□□□□ -1.33
USP11P51784 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 AP000860.1-201ENST00000605250 559 ntBASIC6.72□□□□□ -1.33
USP11P51784 AL096712.1-201ENST00000614561 159 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms