Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL022393.1-201ENST00000625142 1677 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AC083843.3-201ENST00000623679 2186 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 LINC00622-201ENST00000562811 1570 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.8□□□□□ -1.64
BRCC3P46736 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.8□□□□□ -1.64
BRCC3P46736 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRCC3P46736 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
BRCC3P46736 RNU1-83P-201ENST00000363426 164 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AC083799.1-201ENST00000366451 910 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
BRCC3P46736 RNU6-891P-201ENST00000384280 111 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 MIR137-201ENST00000385223 102 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 VDAC2P1-201ENST00000399358 958 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.8□□□□□ -1.64
BRCC3P46736 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.8□□□□□ -1.64
BRCC3P46736 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.8□□□□□ -1.64
BRCC3P46736 RAD23BP1-201ENST00000421404 1227 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.8□□□□□ -1.64
BRCC3P46736 NMNAT1P2-201ENST00000435192 860 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
BRCC3P46736 AL450263.2-201ENST00000439400 589 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 RN7SL98P-201ENST00000462271 300 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AC022336.1-201ENST00000475510 337 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AC020890.1-201ENST00000491837 504 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AC106806.2-201ENST00000509365 500 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.8□□□□□ -1.64
BRCC3P46736 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.8□□□□□ -1.64
BRCC3P46736 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.8□□□□□ -1.64
BRCC3P46736 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRCC3P46736 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.8□□□□□ -1.64
BRCC3P46736 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.8□□□□□ -1.64
BRCC3P46736 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.8□□□□□ -1.64
BRCC3P46736 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.8□□□□□ -1.64
BRCC3P46736 SS18L2P2-201ENST00000583960 235 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRCC3P46736 ARF4P1-201ENST00000605447 541 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.8□□□□□ -1.64
BRCC3P46736 AL158062.1-201ENST00000619632 745 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 AC016717.3-201ENST00000624730 554 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRCC3P46736 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRCC3P46736 AC090017.1-201ENST00000548612 1779 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRCC3P46736 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BRCC3P46736 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BRCC3P46736 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.79□□□□□ -1.64
BRCC3P46736 MAPK10-349ENST00000641767 3661 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 AC026951.1-201ENST00000559530 2459 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
BRCC3P46736 RNU4-44P-201ENST00000363050 141 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BRCC3P46736 OR6C69P-201ENST00000394268 893 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 AL139095.3-201ENST00000419672 1203 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.79□□□□□ -1.64
BRCC3P46736 AC011998.1-201ENST00000433403 117 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.79□□□□□ -1.64
BRCC3P46736 MRPL48P1-201ENST00000445390 636 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 PHBP16-201ENST00000446318 950 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 AC012671.1-201ENST00000451912 203 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 DHFRP3-201ENST00000455595 559 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 RPS27AP17-201ENST00000463344 455 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 FTH1P2-201ENST00000466086 412 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 AC053481.1-201ENST00000467217 306 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 RN7SL303P-201ENST00000469773 251 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BRCC3P46736 RN7SL810P-201ENST00000493031 276 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.79□□□□□ -1.64
BRCC3P46736 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.79□□□□□ -1.64
BRCC3P46736 MIR4675-201ENST00000577898 77 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.79□□□□□ -1.64
BRCC3P46736 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.79□□□□□ -1.64
BRCC3P46736 AC005520.3-201ENST00000602874 370 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 BX322635.1-201ENST00000605804 496 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 AC006065.6-201ENST00000625201 545 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.79□□□□□ -1.64
BRCC3P46736 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.79□□□□□ -1.64
BRCC3P46736 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
BRCC3P46736 STX3-208ENST00000641815 3236 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.79□□□□□ -1.64
BRCC3P46736 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRCC3P46736 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
BRCC3P46736 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.79□□□□□ -1.64
BRCC3P46736 DHX9P1-201ENST00000436565 3076 ntBASIC4.78□□□□□ -1.64
BRCC3P46736 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCC3P46736 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCC3P46736 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.78□□□□□ -1.64
BRCC3P46736 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.78□□□□□ -1.64
BRCC3P46736 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRCC3P46736 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms