Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.97□□□□□ -1.61
SSR1P43307 NDUFA5P1-201ENST00000433858 341 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.97□□□□□ -1.61
SSR1P43307 TDGF1P1-201ENST00000445734 527 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.97□□□□□ -1.61
SSR1P43307 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.97□□□□□ -1.61
SSR1P43307 AC006967.1-201ENST00000467608 589 ntBASIC4.97□□□□□ -1.61
SSR1P43307 RPL7AP6-201ENST00000477943 801 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AL133372.1-201ENST00000493565 745 ntBASIC4.97□□□□□ -1.61
SSR1P43307 RPS4XP18-201ENST00000495480 763 ntBASIC4.97□□□□□ -1.61
SSR1P43307 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.97□□□□□ -1.61
SSR1P43307 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.97□□□□□ -1.61
SSR1P43307 AC091868.1-201ENST00000508746 304 ntBASIC4.97□□□□□ -1.61
SSR1P43307 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.97□□□□□ -1.61
SSR1P43307 IGKV2D-23-201ENST00000518179 286 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.97□□□□□ -1.61
SSR1P43307 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.97□□□□□ -1.61
SSR1P43307 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.97□□□□□ -1.61
SSR1P43307 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.97□□□□□ -1.61
SSR1P43307 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.97□□□□□ -1.61
SSR1P43307 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.97□□□□□ -1.61
SSR1P43307 GCSHP4-201ENST00000538792 439 ntBASIC4.97□□□□□ -1.61
SSR1P43307 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSR1P43307 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.97□□□□□ -1.61
SSR1P43307 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.97□□□□□ -1.61
SSR1P43307 MIR4716-201ENST00000579628 84 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.97□□□□□ -1.61
SSR1P43307 AC008638.3-201ENST00000603341 463 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AL713998.2-201ENST00000604538 1198 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AC073137.1-201ENST00000605636 634 ntBASIC4.97□□□□□ -1.61
SSR1P43307 COX6CP4-201ENST00000605798 228 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AL445222.1-201ENST00000607259 628 ntBASIC4.97□□□□□ -1.61
SSR1P43307 SDR42E1P1-201ENST00000611327 477 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AC074276.2-201ENST00000619891 348 ntBASIC4.97□□□□□ -1.61
SSR1P43307 AL359757.1-201ENST00000623176 255 ntBASIC4.97□□□□□ -1.61
SSR1P43307 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.97□□□□□ -1.61
SSR1P43307 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSR1P43307 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.97□□□□□ -1.61
SSR1P43307 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSR1P43307 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSR1P43307 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.97□□□□□ -1.61
SSR1P43307 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSR1P43307 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SSR1P43307 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SSR1P43307 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.96□□□□□ -1.62
SSR1P43307 NCLP2-201ENST00000416078 1462 ntBASIC4.96□□□□□ -1.62
SSR1P43307 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSR1P43307 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
SSR1P43307 AL589647.1-201ENST00000402485 466 ntBASIC4.96□□□□□ -1.62
SSR1P43307 HDGFP1-201ENST00000405943 252 ntBASIC4.96□□□□□ -1.62
SSR1P43307 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.96□□□□□ -1.62
SSR1P43307 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.96□□□□□ -1.62
SSR1P43307 RPL23AP27-201ENST00000415161 451 ntBASIC4.96□□□□□ -1.62
SSR1P43307 OR2AM1P-201ENST00000422137 422 ntBASIC4.96□□□□□ -1.62
SSR1P43307 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.96□□□□□ -1.62
SSR1P43307 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.96□□□□□ -1.62
SSR1P43307 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSR1P43307 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.96□□□□□ -1.62
SSR1P43307 METTL15P1-201ENST00000481421 1045 ntBASIC4.96□□□□□ -1.62
SSR1P43307 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSR1P43307 AC093763.2-201ENST00000505334 1223 ntBASIC4.96□□□□□ -1.62
SSR1P43307 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.96□□□□□ -1.62
SSR1P43307 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
SSR1P43307 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSR1P43307 RNU1-6P-201ENST00000516290 144 ntBASIC4.96□□□□□ -1.62
SSR1P43307 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.96□□□□□ -1.62
SSR1P43307 OR5AN2P-201ENST00000534535 896 ntBASIC4.96□□□□□ -1.62
SSR1P43307 AC009101.1-201ENST00000568135 242 ntBASIC4.96□□□□□ -1.62
SSR1P43307 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.96□□□□□ -1.62
SSR1P43307 MIR5699-201ENST00000578903 90 ntBASIC4.96□□□□□ -1.62
SSR1P43307 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.96□□□□□ -1.62
SSR1P43307 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.96□□□□□ -1.62
SSR1P43307 AC083899.3-201ENST00000603413 594 ntBASIC4.96□□□□□ -1.62
SSR1P43307 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.96□□□□□ -1.62
SSR1P43307 AL713922.2-201ENST00000619384 716 ntBASIC4.96□□□□□ -1.62
SSR1P43307 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SSR1P43307 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSR1P43307 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SSR1P43307 AC106871.1-201ENST00000568324 3102 ntBASIC4.96□□□□□ -1.62
SSR1P43307 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.96□□□□□ -1.62
SSR1P43307 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.96□□□□□ -1.62
SSR1P43307 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.96□□□□□ -1.62
SSR1P43307 CIR1P2-201ENST00000514821 1342 ntBASIC4.96□□□□□ -1.62
SSR1P43307 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
SSR1P43307 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSR1P43307 AC027290.2-201ENST00000623210 18662 ntBASIC4.95□□□□□ -1.62
SSR1P43307 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.95□□□□□ -1.62
SSR1P43307 INTS6P1-201ENST00000504674 2530 ntBASIC4.95□□□□□ -1.62
SSR1P43307 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSR1P43307 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SSR1P43307 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
SSR1P43307 IQCB2P-201ENST00000401788 1633 ntBASIC4.95□□□□□ -1.62
SSR1P43307 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
SSR1P43307 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSR1P43307 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.95□□□□□ -1.62
SSR1P43307 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSR1P43307 ARL4AP5-201ENST00000404372 599 ntBASIC4.95□□□□□ -1.62
SSR1P43307 DPPA2P3-201ENST00000411853 655 ntBASIC4.95□□□□□ -1.62
SSR1P43307 AMD1P2-201ENST00000412936 992 ntBASIC4.95□□□□□ -1.62
SSR1P43307 RPS27P18-201ENST00000431701 247 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms