Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC3P40938 AL035551.1-201ENST00000446931 348 ntBASIC4.27□□□□□ -1.73
RFC3P40938 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC3P40938 SEPT7P6-201ENST00000469999 1143 ntBASIC4.27□□□□□ -1.73
RFC3P40938 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.27□□□□□ -1.73
RFC3P40938 AC093267.1-201ENST00000489176 961 ntBASIC4.27□□□□□ -1.73
RFC3P40938 AP000926.3-201ENST00000497201 299 ntBASIC4.27□□□□□ -1.73
RFC3P40938 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC3P40938 AC034205.1-201ENST00000520621 638 ntBASIC4.27□□□□□ -1.73
RFC3P40938 AC025857.1-201ENST00000525252 377 ntBASIC4.27□□□□□ -1.73
RFC3P40938 AC009643.1-201ENST00000532030 391 ntBASIC4.27□□□□□ -1.73
RFC3P40938 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.27□□□□□ -1.73
RFC3P40938 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFC3P40938 SULT1C2P2-201ENST00000562517 294 ntBASIC4.27□□□□□ -1.73
RFC3P40938 MIR5096-201ENST00000583713 70 ntBASIC4.27□□□□□ -1.73
RFC3P40938 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.27□□□□□ -1.73
RFC3P40938 AC019193.2-201ENST00000610012 634 ntBASIC4.27□□□□□ -1.73
RFC3P40938 AL023881.1-201ENST00000621088 301 ntBASIC4.27□□□□□ -1.73
RFC3P40938 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RFC3P40938 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.27□□□□□ -1.73
RFC3P40938 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.27□□□□□ -1.73
RFC3P40938 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RFC3P40938 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.26□□□□□ -1.73
RFC3P40938 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
RFC3P40938 AC108751.5-201ENST00000492880 1336 ntBASIC4.26□□□□□ -1.73
RFC3P40938 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC3P40938 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFC3P40938 AC139713.2-215ENST00000641428 5037 ntBASIC4.26□□□□□ -1.73
RFC3P40938 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFC3P40938 RNU4-7P-201ENST00000364758 141 ntBASIC4.26□□□□□ -1.73
RFC3P40938 SNORA71.2-201ENST00000364941 134 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.26□□□□□ -1.73
RFC3P40938 RN7SKP267-201ENST00000410381 285 ntBASIC4.26□□□□□ -1.73
RFC3P40938 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.26□□□□□ -1.73
RFC3P40938 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.26□□□□□ -1.73
RFC3P40938 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AC091390.1-201ENST00000433904 331 ntBASIC4.26□□□□□ -1.73
RFC3P40938 RPL21P133-201ENST00000443666 476 ntBASIC4.26□□□□□ -1.73
RFC3P40938 H2AFZP5-201ENST00000446960 382 ntBASIC4.26□□□□□ -1.73
RFC3P40938 TPT1P12-201ENST00000448968 492 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AC022431.1-201ENST00000450941 438 ntBASIC4.26□□□□□ -1.73
RFC3P40938 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RFC3P40938 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC3P40938 AC026979.1-201ENST00000492525 396 ntBASIC4.26□□□□□ -1.73
RFC3P40938 PPM1AP1-201ENST00000502740 1135 ntBASIC4.26□□□□□ -1.73
RFC3P40938 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFC3P40938 AC109635.6-201ENST00000525487 1113 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.26□□□□□ -1.73
RFC3P40938 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.26□□□□□ -1.73
RFC3P40938 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFC3P40938 FKBP1BP1-201ENST00000553366 325 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AP005901.4-201ENST00000577336 569 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.26□□□□□ -1.73
RFC3P40938 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.26□□□□□ -1.73
RFC3P40938 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.26□□□□□ -1.73
RFC3P40938 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.26□□□□□ -1.73
RFC3P40938 AC131238.1-201ENST00000617135 328 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AC009704.2-201ENST00000618739 483 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AC004232.3-201ENST00000622977 525 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AL359757.1-201ENST00000623176 255 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AP003499.2-201ENST00000624100 483 ntBASIC4.26□□□□□ -1.73
RFC3P40938 AL049536.1-201ENST00000625043 744 ntBASIC4.26□□□□□ -1.73
RFC3P40938 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.26□□□□□ -1.73
RFC3P40938 AC108467.2-201ENST00000617640 1597 ntBASIC4.26□□□□□ -1.73
RFC3P40938 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RFC3P40938 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RFC3P40938 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC3P40938 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC3P40938 AC092435.4-201ENST00000623012 4159 ntBASIC4.25□□□□□ -1.73
RFC3P40938 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC3P40938 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RFC3P40938 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RFC3P40938 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
RFC3P40938 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC3P40938 RNA5SP447-201ENST00000363749 119 ntBASIC4.25□□□□□ -1.73
RFC3P40938 SNORA62-201ENST00000365493 153 ntBASIC4.25□□□□□ -1.73
RFC3P40938 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RFC3P40938 AL136131.1-201ENST00000406079 803 ntBASIC4.25□□□□□ -1.73
RFC3P40938 RPL21P108-201ENST00000413857 481 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AC073136.2-201ENST00000417282 849 ntBASIC4.25□□□□□ -1.73
RFC3P40938 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.25□□□□□ -1.73
RFC3P40938 UQCRBP1-201ENST00000421129 336 ntBASIC4.25□□□□□ -1.73
RFC3P40938 EIF4EP1-201ENST00000422311 642 ntBASIC4.25□□□□□ -1.73
RFC3P40938 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC3P40938 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC3P40938 EIF2S2P3-201ENST00000428356 999 ntBASIC4.25□□□□□ -1.73
RFC3P40938 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC3P40938 FGF7P3-201ENST00000454645 303 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AC010469.1-201ENST00000463864 576 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AC104763.1-201ENST00000475274 360 ntBASIC4.25□□□□□ -1.73
RFC3P40938 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.25□□□□□ -1.73
RFC3P40938 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC3P40938 MTND4LP2-201ENST00000502312 285 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.25□□□□□ -1.73
RFC3P40938 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.25□□□□□ -1.73
RFC3P40938 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RFC3P40938 snoU109.6-201ENST00000516831 118 ntBASIC4.25□□□□□ -1.73
RFC3P40938 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC3P40938 SMG1P6-201ENST00000532337 2930 ntBASIC4.25□□□□□ -1.73
RFC3P40938 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms