Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RORAP35398 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RORAP35398 MIR129-1-201ENST00000384972 72 ntBASIC4.47□□□□□ -1.69
RORAP35398 LAP3P1-201ENST00000403648 294 ntBASIC4.47□□□□□ -1.69
RORAP35398 AL121834.1-202ENST00000404494 277 ntBASIC4.47□□□□□ -1.69
RORAP35398 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.47□□□□□ -1.69
RORAP35398 RN7SKP267-201ENST00000410381 285 ntBASIC4.47□□□□□ -1.69
RORAP35398 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 AC140479.3-201ENST00000418944 1126 ntBASIC4.47□□□□□ -1.69
RORAP35398 EIF4A1P1-201ENST00000420241 934 ntBASIC4.47□□□□□ -1.69
RORAP35398 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.47□□□□□ -1.69
RORAP35398 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 AC079168.2-201ENST00000453977 416 ntBASIC4.47□□□□□ -1.69
RORAP35398 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 PPIAP21-201ENST00000464473 501 ntBASIC4.47□□□□□ -1.69
RORAP35398 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.47□□□□□ -1.69
RORAP35398 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.47□□□□□ -1.69
RORAP35398 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.47□□□□□ -1.69
RORAP35398 DYNLL1P4-201ENST00000549314 266 ntBASIC4.47□□□□□ -1.69
RORAP35398 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.47□□□□□ -1.69
RORAP35398 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.47□□□□□ -1.69
RORAP35398 CYCSP40-201ENST00000575927 294 ntBASIC4.47□□□□□ -1.69
RORAP35398 RN7SL652P-201ENST00000577769 300 ntBASIC4.47□□□□□ -1.69
RORAP35398 AP005119.2-201ENST00000579735 1105 ntBASIC4.47□□□□□ -1.69
RORAP35398 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.47□□□□□ -1.69
RORAP35398 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RORAP35398 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RORAP35398 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.47□□□□□ -1.69
RORAP35398 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RORAP35398 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RORAP35398 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RORAP35398 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.47□□□□□ -1.69
RORAP35398 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RORAP35398 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.46□□□□□ -1.69
RORAP35398 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RORAP35398 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.46□□□□□ -1.7
RORAP35398 PHKBP1-201ENST00000450951 1951 ntBASIC4.46□□□□□ -1.7
RORAP35398 AL359922.3-201ENST00000624779 1670 ntBASIC4.46□□□□□ -1.7
RORAP35398 MIR365B-201ENST00000362317 111 ntBASIC4.46□□□□□ -1.7
RORAP35398 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RORAP35398 AL590762.2-201ENST00000395798 571 ntBASIC4.46□□□□□ -1.7
RORAP35398 U3.35-201ENST00000408405 208 ntBASIC4.46□□□□□ -1.7
RORAP35398 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.46□□□□□ -1.7
RORAP35398 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.46□□□□□ -1.7
RORAP35398 AC009480.2-201ENST00000422916 432 ntBASIC4.46□□□□□ -1.7
RORAP35398 RPL18P10-201ENST00000425606 538 ntBASIC4.46□□□□□ -1.7
RORAP35398 CENPIP1-201ENST00000425713 902 ntBASIC4.46□□□□□ -1.7
RORAP35398 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.46□□□□□ -1.7
RORAP35398 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.46□□□□□ -1.7
RORAP35398 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RORAP35398 AC108463.1-201ENST00000450258 347 ntBASIC4.46□□□□□ -1.7
RORAP35398 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.46□□□□□ -1.7
RORAP35398 EIF2S2P5-201ENST00000457635 968 ntBASIC4.46□□□□□ -1.7
RORAP35398 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.46□□□□□ -1.7
RORAP35398 NDUFA5P9-201ENST00000472609 340 ntBASIC4.46□□□□□ -1.7
RORAP35398 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.46□□□□□ -1.7
RORAP35398 AC090686.1-201ENST00000481577 749 ntBASIC4.46□□□□□ -1.7
RORAP35398 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.46□□□□□ -1.7
RORAP35398 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.46□□□□□ -1.7
RORAP35398 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.46□□□□□ -1.7
RORAP35398 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RORAP35398 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.46□□□□□ -1.7
RORAP35398 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RORAP35398 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.46□□□□□ -1.7
RORAP35398 MIR4284-201ENST00000578924 81 ntBASIC4.46□□□□□ -1.7
RORAP35398 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.46□□□□□ -1.7
RORAP35398 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.46□□□□□ -1.7
RORAP35398 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RORAP35398 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.46□□□□□ -1.7
RORAP35398 AC093765.1-201ENST00000603758 881 ntBASIC4.46□□□□□ -1.7
RORAP35398 AC138473.1-201ENST00000605717 526 ntBASIC4.46□□□□□ -1.7
RORAP35398 AC116447.1-201ENST00000613153 453 ntBASIC4.46□□□□□ -1.7
RORAP35398 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.46□□□□□ -1.7
RORAP35398 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.46□□□□□ -1.7
RORAP35398 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RORAP35398 AL592148.3-201ENST00000608771 2646 ntBASIC4.46□□□□□ -1.7
RORAP35398 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RORAP35398 AC009229.4-201ENST00000623854 1947 ntBASIC4.46□□□□□ -1.7
RORAP35398 DHX9P1-201ENST00000436565 3076 ntBASIC4.46□□□□□ -1.7
RORAP35398 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RORAP35398 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RORAP35398 AL356317.1-201ENST00000396110 1436 ntBASIC4.46□□□□□ -1.7
RORAP35398 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
RORAP35398 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RORAP35398 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.45□□□□□ -1.7
RORAP35398 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.45□□□□□ -1.7
RORAP35398 AC074029.4-201ENST00000624796 1859 ntBASIC4.45□□□□□ -1.7
RORAP35398 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.45□□□□□ -1.7
RORAP35398 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms