Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.44□□□□□ -1.7
SHMT2P34897 AC015912.2-201ENST00000571053 181 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.44□□□□□ -1.7
SHMT2P34897 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.44□□□□□ -1.7
SHMT2P34897 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.44□□□□□ -1.7
SHMT2P34897 AC093765.1-201ENST00000603758 881 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 AL008729.2-201ENST00000606393 473 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 AP003499.2-201ENST00000624100 483 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 AL049536.1-201ENST00000625043 744 ntBASIC4.44□□□□□ -1.7
SHMT2P34897 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.44□□□□□ -1.7
SHMT2P34897 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.44□□□□□ -1.7
SHMT2P34897 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHMT2P34897 HSPD1P14-201ENST00000432666 1618 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHMT2P34897 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.43□□□□□ -1.7
SHMT2P34897 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHMT2P34897 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHMT2P34897 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHMT2P34897 AL132640.2-201ENST00000559968 1698 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHMT2P34897 AC010132.2-201ENST00000295493 1043 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SHMT2P34897 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHMT2P34897 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 OR13C3-201ENST00000374781 1108 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 MIR129-1-201ENST00000384972 72 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 GLULP6-201ENST00000399502 913 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 CEACAMP8-201ENST00000413902 580 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 RPA2P2-201ENST00000419698 796 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 RPL21P43-201ENST00000425440 472 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 UBE2V2P3-201ENST00000433562 437 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHMT2P34897 AL138787.1-202ENST00000437804 898 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.43□□□□□ -1.7
SHMT2P34897 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.43□□□□□ -1.7
SHMT2P34897 AC022336.1-201ENST00000475510 337 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 AK3P4-201ENST00000504283 583 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHMT2P34897 AC093720.1-201ENST00000505681 714 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.43□□□□□ -1.7
SHMT2P34897 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.43□□□□□ -1.7
SHMT2P34897 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.43□□□□□ -1.7
SHMT2P34897 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHMT2P34897 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHMT2P34897 AP005119.2-201ENST00000579735 1105 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.43□□□□□ -1.7
SHMT2P34897 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.43□□□□□ -1.7
SHMT2P34897 AC020915.5-201ENST00000596836 964 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 AC005520.3-201ENST00000602874 370 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 AC100847.1-201ENST00000611316 481 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 AP005019.3-201ENST00000620418 560 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 AC055839.1-201ENST00000634467 498 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHMT2P34897 RLIMP2-201ENST00000427891 1563 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SHMT2P34897 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHMT2P34897 MAPK10-303ENST00000641324 3959 ntBASIC4.43□□□□□ -1.7
SHMT2P34897 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHMT2P34897 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SHMT2P34897 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.42□□□□□ -1.7
SHMT2P34897 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
SHMT2P34897 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
SHMT2P34897 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHMT2P34897 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.42□□□□□ -1.7
SHMT2P34897 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHMT2P34897 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.42□□□□□ -1.7
SHMT2P34897 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.42□□□□□ -1.7
SHMT2P34897 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHMT2P34897 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SHMT2P34897 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SHMT2P34897 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.42□□□□□ -1.7
SHMT2P34897 RN7SKP167-201ENST00000411047 285 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHMT2P34897 AC006065.1-201ENST00000422539 802 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 PDSS1P1-201ENST00000422953 1114 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.42□□□□□ -1.7
SHMT2P34897 RPS12P10-201ENST00000427031 377 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.42□□□□□ -1.7
SHMT2P34897 CNOT7P1-201ENST00000429006 852 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHMT2P34897 NDUFA5P1-201ENST00000433858 341 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.42□□□□□ -1.7
SHMT2P34897 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.42□□□□□ -1.7
SHMT2P34897 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.42□□□□□ -1.7
SHMT2P34897 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.42□□□□□ -1.7
SHMT2P34897 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.42□□□□□ -1.7
SHMT2P34897 IGLV3-26-201ENST00000520756 302 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.42□□□□□ -1.7
SHMT2P34897 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.42□□□□□ -1.7
SHMT2P34897 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.42□□□□□ -1.7
SHMT2P34897 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.42□□□□□ -1.7
SHMT2P34897 HMGB2P1-201ENST00000591146 634 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.42□□□□□ -1.7
SHMT2P34897 AC008782.1-201ENST00000603386 430 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 GMCL1P2-201ENST00000605230 823 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.42□□□□□ -1.7
SHMT2P34897 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SHMT2P34897 AC010435.1-201ENST00000623353 1177 ntBASIC4.42□□□□□ -1.7
SHMT2P34897 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.42□□□□□ -1.7
SHMT2P34897 AC091046.3-201ENST00000631455 1574 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms