Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 BTF3P13-201ENST00000513224 490 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.81□□□□□ -1.64
CDH3P22223 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH3P22223 AC021006.3-201ENST00000530771 192 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AC092451.2-201ENST00000538746 658 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.81□□□□□ -1.64
CDH3P22223 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 AC106785.3-201ENST00000564064 847 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AC079148.1-201ENST00000565944 819 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AC233266.2-201ENST00000567067 528 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 AC119501.1-201ENST00000603646 475 ntBASIC4.81□□□□□ -1.64
CDH3P22223 BNIP3P19-201ENST00000605397 577 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH3P22223 AC116447.1-201ENST00000613153 453 ntBASIC4.81□□□□□ -1.64
CDH3P22223 AC108359.1-201ENST00000616451 1211 ntBASIC4.81□□□□□ -1.64
CDH3P22223 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.81□□□□□ -1.64
CDH3P22223 LINC00901.1-201ENST00000617252 152 ntBASIC4.81□□□□□ -1.64
CDH3P22223 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
CDH3P22223 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH3P22223 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH3P22223 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH3P22223 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH3P22223 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH3P22223 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH3P22223 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CDH3P22223 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CDH3P22223 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
CDH3P22223 IL6STP1-201ENST00000346911 1020 ntBASIC4.8□□□□□ -1.64
CDH3P22223 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDH3P22223 RNU6-31P-201ENST00000384388 108 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AL035419.1-201ENST00000397037 564 ntBASIC4.8□□□□□ -1.64
CDH3P22223 BTF3P9-201ENST00000418784 283 ntBASIC4.8□□□□□ -1.64
CDH3P22223 GTF2IP2-201ENST00000424290 697 ntBASIC4.8□□□□□ -1.64
CDH3P22223 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.8□□□□□ -1.64
CDH3P22223 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH3P22223 MTCYBP29-201ENST00000436327 1006 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH3P22223 RPS29P9-201ENST00000440360 171 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH3P22223 AL353898.1-201ENST00000444055 238 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AC091685.2-201ENST00000454924 864 ntBASIC4.8□□□□□ -1.64
CDH3P22223 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH3P22223 AC096741.1-201ENST00000472250 846 ntBASIC4.8□□□□□ -1.64
CDH3P22223 RPL23AP37-201ENST00000479658 549 ntBASIC4.8□□□□□ -1.64
CDH3P22223 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH3P22223 SNORA76.2-201ENST00000517095 137 ntBASIC4.8□□□□□ -1.64
CDH3P22223 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH3P22223 AC012339.2-201ENST00000523996 453 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH3P22223 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH3P22223 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH3P22223 HMGB3P26-201ENST00000560051 582 ntBASIC4.8□□□□□ -1.64
CDH3P22223 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH3P22223 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH3P22223 MIR4480-201ENST00000582492 71 ntBASIC4.8□□□□□ -1.64
CDH3P22223 SNX6P1-201ENST00000601728 1224 ntBASIC4.8□□□□□ -1.64
CDH3P22223 RNF138P2-201ENST00000603490 592 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AC087783.2-201ENST00000605070 562 ntBASIC4.8□□□□□ -1.64
CDH3P22223 FAM25E-202ENST00000608562 189 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AL096803.3-201ENST00000609032 532 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AC097505.1-201ENST00000610199 565 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AL645927.2-201ENST00000618350 349 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AL163051.2-201ENST00000618976 735 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH3P22223 AC087385.3-201ENST00000620477 187 ntBASIC4.8□□□□□ -1.64
CDH3P22223 AC091953.3-201ENST00000623220 236 ntBASIC4.8□□□□□ -1.64
CDH3P22223 RPL23AP61-201ENST00000623642 466 ntBASIC4.8□□□□□ -1.64
CDH3P22223 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH3P22223 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH3P22223 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
CDH3P22223 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH3P22223 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH3P22223 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CDH3P22223 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDH3P22223 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
CDH3P22223 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH3P22223 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 CASC19-284ENST00000642142 1868 ntBASIC4.79□□□□□ -1.64
CDH3P22223 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH3P22223 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 AC139713.2-215ENST00000641428 5037 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AC007342.7-201ENST00000624610 2337 ntBASIC4.79□□□□□ -1.64
CDH3P22223 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms