Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPS4XP15-201ENST00000489210 795 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 UBA52P3-201ENST00000491303 382 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 RPS4XP14-201ENST00000493072 781 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.98□□□□□ -1.29
ERCC3P19447 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.98□□□□□ -1.29
ERCC3P19447 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.98□□□□□ -1.29
ERCC3P19447 PCNAP4-201ENST00000532690 730 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.98□□□□□ -1.29
ERCC3P19447 AP000873.5-201ENST00000533906 236 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.98□□□□□ -1.29
ERCC3P19447 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 AC090022.1-201ENST00000546569 311 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.98□□□□□ -1.29
ERCC3P19447 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 AC141002.1-201ENST00000607025 279 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 AL136131.3-201ENST00000607600 188 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.98□□□□□ -1.29
ERCC3P19447 AC026634.1-201ENST00000634369 198 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ERCC3P19447 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.98□□□□□ -1.29
ERCC3P19447 AC092104.1-201ENST00000497346 1441 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 AC011369.2-201ENST00000624423 1567 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
ERCC3P19447 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.98□□□□□ -1.29
ERCC3P19447 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.98□□□□□ -1.29
ERCC3P19447 GNL2P1-201ENST00000451274 2190 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
ERCC3P19447 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
ERCC3P19447 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.98□□□□□ -1.29
ERCC3P19447 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.98□□□□□ -1.29
ERCC3P19447 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
ERCC3P19447 MTND4P34-201ENST00000572715 1371 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
ERCC3P19447 RNA5SP375-201ENST00000362975 119 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 Y_RNA.302-201ENST00000364997 102 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AL121978.1-201ENST00000402778 359 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 RPS3AP2-201ENST00000407190 754 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.97□□□□□ -1.29
ERCC3P19447 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.97□□□□□ -1.29
ERCC3P19447 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 AL513325.1-201ENST00000417716 1034 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 Z99497.1-201ENST00000421282 135 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 AC006366.1-201ENST00000422002 759 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AC009965.2-201ENST00000425328 970 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.97□□□□□ -1.29
ERCC3P19447 NPM1P24-201ENST00000428039 894 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.97□□□□□ -1.29
ERCC3P19447 AC010881.1-201ENST00000433830 235 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 TUBB4BP6-201ENST00000437576 479 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 SUMO2P3-201ENST00000438311 288 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 MTCO1P14-201ENST00000441695 1559 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 AL512593.1-201ENST00000444758 779 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 COX6CP2-201ENST00000444980 225 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.97□□□□□ -1.29
ERCC3P19447 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.97□□□□□ -1.29
ERCC3P19447 YWHAEP1-201ENST00000453697 763 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.97□□□□□ -1.29
ERCC3P19447 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.97□□□□□ -1.29
ERCC3P19447 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.97□□□□□ -1.29
ERCC3P19447 AC239860.2-201ENST00000525886 270 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AP005639.1-201ENST00000526939 192 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 RPA2P3-201ENST00000533268 770 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.97□□□□□ -1.29
ERCC3P19447 HSPE1P2-201ENST00000554777 306 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.97□□□□□ -1.29
ERCC3P19447 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.97□□□□□ -1.29
ERCC3P19447 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.97□□□□□ -1.29
ERCC3P19447 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 AC083899.3-201ENST00000603413 594 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AC092354.1-201ENST00000606057 376 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AC099842.1-201ENST00000619919 596 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AL137067.2-201ENST00000621202 131 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AC009878.1-201ENST00000621819 340 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AC135068.5-201ENST00000624197 983 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AL356121.2-201ENST00000624715 780 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AC087565.3-203ENST00000641018 837 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AP001541.1-201ENST00000623322 1904 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 AC025125.1-201ENST00000624743 1922 ntBASIC6.97□□□□□ -1.29
ERCC3P19447 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.97□□□□□ -1.29
ERCC3P19447 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
ERCC3P19447 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
ERCC3P19447 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
ERCC3P19447 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.96□□□□□ -1.29
ERCC3P19447 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ERCC3P19447 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.96□□□□□ -1.29
ERCC3P19447 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
ERCC3P19447 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms