Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC022106.2-201ENST00000620114 757 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
COL11A1P12107 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 CYP1D1P-201ENST00000416662 1433 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AP001273.1-201ENST00000624493 3152 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
COL11A1P12107 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
COL11A1P12107 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
COL11A1P12107 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 ERCC6-202ENST00000374127 1782 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.83□□□□□ -1.64
COL11A1P12107 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
COL11A1P12107 AL117339.2-201ENST00000430475 180 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.83□□□□□ -1.64
COL11A1P12107 RPS11P1-201ENST00000451072 473 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 ATP5G1P3-201ENST00000463301 410 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AC091959.2-201ENST00000477363 321 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 MORF4L2P1-201ENST00000503761 858 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.83□□□□□ -1.64
COL11A1P12107 AC007991.1-201ENST00000522680 631 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 YPEL5P3-201ENST00000547227 352 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AGGF1P6-201ENST00000569213 976 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AC027455.1-201ENST00000574104 594 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.83□□□□□ -1.64
COL11A1P12107 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.83□□□□□ -1.64
COL11A1P12107 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
COL11A1P12107 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
COL11A1P12107 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 TCP11X1-202ENST00000622971 1372 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 AL133268.1-201ENST00000405676 1401 ntBASIC4.83□□□□□ -1.64
COL11A1P12107 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL11A1P12107 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL11A1P12107 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL11A1P12107 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL11A1P12107 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL11A1P12107 RNA5SP175-201ENST00000364275 119 ntBASIC4.82□□□□□ -1.64
COL11A1P12107 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.82□□□□□ -1.64
COL11A1P12107 AC115285.1-201ENST00000424879 736 ntBASIC4.82□□□□□ -1.64
COL11A1P12107 RNA5SP103-201ENST00000459503 118 ntBASIC4.82□□□□□ -1.64
COL11A1P12107 RNA5SP360-201ENST00000516555 118 ntBASIC4.82□□□□□ -1.64
COL11A1P12107 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.82□□□□□ -1.64
COL11A1P12107 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.82□□□□□ -1.64
COL11A1P12107 AL021997.2-201ENST00000615674 271 ntBASIC4.82□□□□□ -1.64
COL11A1P12107 AC091905.2-201ENST00000623143 306 ntBASIC4.82□□□□□ -1.64
COL11A1P12107 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
COL11A1P12107 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL11A1P12107 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL11A1P12107 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL11A1P12107 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL11A1P12107 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL11A1P12107 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 ENSAP1-201ENST00000392855 326 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 AL078604.1-201ENST00000404609 466 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 UBTFL3-201ENST00000418934 1024 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 AC069157.1-201ENST00000421749 137 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.81□□□□□ -1.64
COL11A1P12107 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.81□□□□□ -1.64
COL11A1P12107 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 UBTFL6-201ENST00000477929 1024 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.81□□□□□ -1.64
COL11A1P12107 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.81□□□□□ -1.64
COL11A1P12107 KRT19P6-201ENST00000510983 209 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.81□□□□□ -1.64
COL11A1P12107 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.81□□□□□ -1.64
COL11A1P12107 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.81□□□□□ -1.64
COL11A1P12107 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COL11A1P12107 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL11A1P12107 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL11A1P12107 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 RNA5SP124-201ENST00000362739 110 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 SNORD96B-201ENST00000386148 79 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 MIR1271-201ENST00000408537 86 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 HSPE1P12-201ENST00000412576 301 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.81□□□□□ -1.64
COL11A1P12107 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.81□□□□□ -1.64
COL11A1P12107 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.81□□□□□ -1.64
COL11A1P12107 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.81□□□□□ -1.64
COL11A1P12107 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.81□□□□□ -1.64
COL11A1P12107 AC053481.4-201ENST00000583164 216 ntBASIC4.81□□□□□ -1.64
COL11A1P12107 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.81□□□□□ -1.64
COL11A1P12107 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.81□□□□□ -1.64
COL11A1P12107 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COL11A1P12107 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL11A1P12107 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms