Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC209154.1-201ENST00000582156 337 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 AC110743.1-201ENST00000584870 478 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.08□□□□□ -1.76
UBCP0CG48 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 SUMO2P15-201ENST00000604285 278 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 AP003497.2-201ENST00000624220 967 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 AL442639.1-201ENST00000625030 1899 ntBASIC4.08□□□□□ -1.76
UBCP0CG48 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.08□□□□□ -1.76
UBCP0CG48 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
UBCP0CG48 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBCP0CG48 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 AC006971.1-201ENST00000407916 4486 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.07□□□□□ -1.76
UBCP0CG48 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 AL590763.1-201ENST00000398297 1545 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 RNA5SP52-201ENST00000362448 134 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 RN7SKP95-201ENST00000362860 303 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 GCNT6-201ENST00000379591 934 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 CHMP1B2P-201ENST00000399581 597 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.07□□□□□ -1.76
UBCP0CG48 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 TXNP2-201ENST00000443918 295 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 H2AFZP5-201ENST00000446960 382 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AL121877.1-201ENST00000453704 622 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.07□□□□□ -1.76
UBCP0CG48 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.07□□□□□ -1.76
UBCP0CG48 BX284632.1-201ENST00000478218 541 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AC012158.1-204ENST00000483430 465 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AC083829.1-201ENST00000503756 657 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 GAPDHP56-201ENST00000506031 988 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AC091868.1-201ENST00000508746 304 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.07□□□□□ -1.76
UBCP0CG48 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.07□□□□□ -1.76
UBCP0CG48 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.07□□□□□ -1.76
UBCP0CG48 AC067904.2-201ENST00000517322 1283 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.07□□□□□ -1.76
UBCP0CG48 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.07□□□□□ -1.76
UBCP0CG48 AC100770.1-201ENST00000532310 322 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 HAUS8P1-201ENST00000549005 542 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.07□□□□□ -1.76
UBCP0CG48 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.07□□□□□ -1.76
UBCP0CG48 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 MIR3176-201ENST00000582210 90 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.07□□□□□ -1.76
UBCP0CG48 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.07□□□□□ -1.76
UBCP0CG48 AC007423.1-201ENST00000605009 627 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AL391358.1-201ENST00000605342 190 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AC107905.1-201ENST00000616204 426 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 uc_338.9-201ENST00000617424 182 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 AC023509.5-201ENST00000617434 807 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.07□□□□□ -1.76
UBCP0CG48 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.07□□□□□ -1.76
UBCP0CG48 AP006248.2-201ENST00000623309 592 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.07□□□□□ -1.76
UBCP0CG48 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.07□□□□□ -1.76
UBCP0CG48 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.07□□□□□ -1.76
UBCP0CG48 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBCP0CG48 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
UBCP0CG48 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.07□□□□□ -1.76
UBCP0CG48 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
UBCP0CG48 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBCP0CG48 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBCP0CG48 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBCP0CG48 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.06□□□□□ -1.76
UBCP0CG48 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBCP0CG48 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.06□□□□□ -1.76
UBCP0CG48 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
UBCP0CG48 RHOT1P2-201ENST00000366423 333 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBCP0CG48 RNU1-106P-201ENST00000384382 164 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 Z98745.1-201ENST00000402553 494 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.06□□□□□ -1.76
UBCP0CG48 RN7SKP206-201ENST00000410823 293 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.06□□□□□ -1.76
UBCP0CG48 CHEK2P3-201ENST00000416118 248 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 AC004552.1-201ENST00000419089 348 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.06□□□□□ -1.76
UBCP0CG48 RPL21P91-201ENST00000429231 479 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.06□□□□□ -1.76
UBCP0CG48 RPL12P11-201ENST00000439970 501 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 AC112498.1-201ENST00000444401 332 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 SUMO2P1-206ENST00000445436 284 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms