Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNRPA1P09661 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNRPA1P09661 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.21□□□□□ -1.42
SNRPA1P09661 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SNRPA1P09661 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNRPA1P09661 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.21□□□□□ -1.42
SNRPA1P09661 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SNRPA1P09661 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SNRPA1P09661 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNRPA1P09661 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNRPA1P09661 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
SNRPA1P09661 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SNRPA1P09661 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNRPA1P09661 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.2□□□□□ -1.42
SNRPA1P09661 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
SNRPA1P09661 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNRPA1P09661 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.2□□□□□ -1.42
SNRPA1P09661 SNORD116-2-201ENST00000384274 95 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 SNORD116-6-201ENST00000384711 96 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNRPA1P09661 AC007068.1-201ENST00000396690 844 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 TAF9BP2-201ENST00000400856 499 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 RN7SKP16-201ENST00000410180 299 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AL445183.3-201ENST00000414168 502 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 LINC00993-201ENST00000420453 540 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.2□□□□□ -1.42
SNRPA1P09661 RPS7P2-201ENST00000435134 607 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AL627224.1-201ENST00000448334 444 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.2□□□□□ -1.42
SNRPA1P09661 Y_RNA.719-201ENST00000517156 106 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AL110118.1-201ENST00000553543 400 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 OR4U1P-201ENST00000554958 912 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.2□□□□□ -1.42
SNRPA1P09661 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AC002487.1-201ENST00000604565 994 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AC100847.1-201ENST00000611316 481 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AC012414.7-202ENST00000622705 1090 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 AP003399.1-201ENST00000637534 361 ntBASIC6.2□□□□□ -1.42
SNRPA1P09661 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SNRPA1P09661 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNRPA1P09661 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNRPA1P09661 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNRPA1P09661 MTND5P31-201ENST00000419366 1374 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNRPA1P09661 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNRPA1P09661 AC063976.2-201ENST00000425667 3556 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNRPA1P09661 RNU6-207P-201ENST00000384137 107 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.19□□□□□ -1.42
SNRPA1P09661 TATDN1P1-201ENST00000414123 891 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNRPA1P09661 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.19□□□□□ -1.42
SNRPA1P09661 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.19□□□□□ -1.42
SNRPA1P09661 NDUFA5P9-201ENST00000472609 340 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 RN7SL558P-201ENST00000497468 299 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNRPA1P09661 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.19□□□□□ -1.42
SNRPA1P09661 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.19□□□□□ -1.42
SNRPA1P09661 AC073358.1-201ENST00000505671 684 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 RNU2-30P-201ENST00000516209 141 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.19□□□□□ -1.42
SNRPA1P09661 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.19□□□□□ -1.42
SNRPA1P09661 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNRPA1P09661 NPM1P5-201ENST00000557228 838 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.19□□□□□ -1.42
SNRPA1P09661 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.19□□□□□ -1.42
SNRPA1P09661 SNORA74C-1-201ENST00000580726 201 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 AC004232.3-201ENST00000622977 525 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 AP003485.2-201ENST00000623636 610 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 AP002967.1-201ENST00000624203 539 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 AC019080.5-201ENST00000624891 757 ntBASIC6.19□□□□□ -1.42
SNRPA1P09661 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNRPA1P09661 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
SNRPA1P09661 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.19□□□□□ -1.42
SNRPA1P09661 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
SNRPA1P09661 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNRPA1P09661 TRIM51GP-201ENST00000534741 1350 ntBASIC6.18□□□□□ -1.42
SNRPA1P09661 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNRPA1P09661 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNRPA1P09661 AC007382.1-201ENST00000624376 2618 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms