Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TPM1P09493 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TPM1P09493 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.91□□□□□ -1.62
TPM1P09493 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.62
TPM1P09493 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.9□□□□□ -1.62
TPM1P09493 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
TPM1P09493 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TPM1P09493 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
TPM1P09493 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TPM1P09493 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TPM1P09493 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TPM1P09493 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.9□□□□□ -1.62
TPM1P09493 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TPM1P09493 RNA5SP305-201ENST00000362665 119 ntBASIC4.9□□□□□ -1.63
TPM1P09493 RNU4-7P-201ENST00000364758 141 ntBASIC4.9□□□□□ -1.63
TPM1P09493 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.9□□□□□ -1.63
TPM1P09493 JKAMPP1-201ENST00000413804 919 ntBASIC4.9□□□□□ -1.63
TPM1P09493 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.9□□□□□ -1.63
TPM1P09493 PRELID3BP10-201ENST00000431957 584 ntBASIC4.9□□□□□ -1.63
TPM1P09493 RPS20P1-201ENST00000434853 354 ntBASIC4.9□□□□□ -1.63
TPM1P09493 CYCSP11-201ENST00000436426 315 ntBASIC4.9□□□□□ -1.63
TPM1P09493 GSTA7P-201ENST00000438425 448 ntBASIC4.9□□□□□ -1.63
TPM1P09493 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.9□□□□□ -1.63
TPM1P09493 AC012671.1-201ENST00000451912 203 ntBASIC4.9□□□□□ -1.63
TPM1P09493 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.9□□□□□ -1.63
TPM1P09493 AC083829.1-201ENST00000503756 657 ntBASIC4.9□□□□□ -1.63
TPM1P09493 BTF3P13-201ENST00000513224 490 ntBASIC4.9□□□□□ -1.63
TPM1P09493 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.9□□□□□ -1.63
TPM1P09493 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.9□□□□□ -1.63
TPM1P09493 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.9□□□□□ -1.63
TPM1P09493 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.9□□□□□ -1.63
TPM1P09493 AP001880.2-201ENST00000538233 448 ntBASIC4.9□□□□□ -1.63
TPM1P09493 EDDM3DP-201ENST00000554692 434 ntBASIC4.9□□□□□ -1.63
TPM1P09493 AC068446.3-201ENST00000555285 382 ntBASIC4.9□□□□□ -1.63
TPM1P09493 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.9□□□□□ -1.63
TPM1P09493 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.9□□□□□ -1.63
TPM1P09493 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.9□□□□□ -1.63
TPM1P09493 AC090181.2-201ENST00000602975 672 ntBASIC4.9□□□□□ -1.63
TPM1P09493 Z98200.1-201ENST00000607298 470 ntBASIC4.9□□□□□ -1.63
TPM1P09493 AC233309.1-201ENST00000619522 751 ntBASIC4.9□□□□□ -1.63
TPM1P09493 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.9□□□□□ -1.63
TPM1P09493 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.9□□□□□ -1.63
TPM1P09493 AL590763.1-201ENST00000398297 1545 ntBASIC4.9□□□□□ -1.63
TPM1P09493 AC090017.1-201ENST00000548612 1779 ntBASIC4.9□□□□□ -1.63
TPM1P09493 LINC00622-201ENST00000562811 1570 ntBASIC4.9□□□□□ -1.63
TPM1P09493 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TPM1P09493 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TPM1P09493 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TPM1P09493 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TPM1P09493 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TPM1P09493 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.89□□□□□ -1.63
TPM1P09493 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.89□□□□□ -1.63
TPM1P09493 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TPM1P09493 RNU6-984P-201ENST00000363236 109 ntBASIC4.89□□□□□ -1.63
TPM1P09493 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.89□□□□□ -1.63
TPM1P09493 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.89□□□□□ -1.63
TPM1P09493 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.89□□□□□ -1.63
TPM1P09493 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TPM1P09493 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
TPM1P09493 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.89□□□□□ -1.63
TPM1P09493 SNORA74C-2-201ENST00000411179 201 ntBASIC4.89□□□□□ -1.63
TPM1P09493 RN7SKP273-201ENST00000411392 314 ntBASIC4.89□□□□□ -1.63
TPM1P09493 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.89□□□□□ -1.63
TPM1P09493 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.89□□□□□ -1.63
TPM1P09493 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.89□□□□□ -1.63
TPM1P09493 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.89□□□□□ -1.63
TPM1P09493 RPS26P15-201ENST00000488067 348 ntBASIC4.89□□□□□ -1.63
TPM1P09493 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.89□□□□□ -1.63
TPM1P09493 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.89□□□□□ -1.63
TPM1P09493 AC106872.4-201ENST00000510050 523 ntBASIC4.89□□□□□ -1.63
TPM1P09493 IGLVIV-53-201ENST00000520107 367 ntBASIC4.89□□□□□ -1.63
TPM1P09493 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.89□□□□□ -1.63
TPM1P09493 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.89□□□□□ -1.63
TPM1P09493 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TPM1P09493 AL110118.1-201ENST00000553543 400 ntBASIC4.89□□□□□ -1.63
TPM1P09493 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.89□□□□□ -1.63
TPM1P09493 AC018552.3-201ENST00000567416 561 ntBASIC4.89□□□□□ -1.63
TPM1P09493 AC012146.2-201ENST00000576545 416 ntBASIC4.89□□□□□ -1.63
TPM1P09493 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.89□□□□□ -1.63
TPM1P09493 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TPM1P09493 GMCL1P2-201ENST00000605230 823 ntBASIC4.89□□□□□ -1.63
TPM1P09493 AC078899.5-201ENST00000612475 178 ntBASIC4.89□□□□□ -1.63
TPM1P09493 AC022960.2-201ENST00000616300 666 ntBASIC4.89□□□□□ -1.63
TPM1P09493 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.89□□□□□ -1.63
TPM1P09493 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TPM1P09493 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
TPM1P09493 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.89□□□□□ -1.63
TPM1P09493 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TPM1P09493 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TPM1P09493 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TPM1P09493 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TPM1P09493 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TPM1P09493 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TPM1P09493 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
TPM1P09493 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TPM1P09493 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.88□□□□□ -1.63
TPM1P09493 MIR365B-201ENST00000362317 111 ntBASIC4.88□□□□□ -1.63
TPM1P09493 RNU6-171P-201ENST00000384354 107 ntBASIC4.88□□□□□ -1.63
TPM1P09493 MIR765-201ENST00000390226 114 ntBASIC4.88□□□□□ -1.63
TPM1P09493 HSPD1P16-201ENST00000402302 394 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms