Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNA1P02708 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA1P02708 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNA1P02708 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA1P02708 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNA1P02708 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA1P02708 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA1P02708 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA1P02708 DDX18P3-201ENST00000404856 2007 ntBASIC4.99□□□□□ -1.61
CHRNA1P02708 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRNA1P02708 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA1P02708 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CHRNA1P02708 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHRNA1P02708 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CHRNA1P02708 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHRNA1P02708 MIR365B-201ENST00000362317 111 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 UBBP2-201ENST00000376781 231 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 RNU6-178P-201ENST00000384631 104 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHRNA1P02708 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 AC011933.1-201ENST00000413334 321 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 RAD23BP1-201ENST00000421404 1227 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 RPS27AP12-201ENST00000429552 465 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 AL392003.1-201ENST00000434394 243 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 HMGB3P10-201ENST00000434734 572 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 RPL23AP43-201ENST00000446445 471 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 C1DP3-201ENST00000455013 423 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 AC116533.1-201ENST00000459748 321 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 RN7SL98P-201ENST00000462271 300 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNA1P02708 RPL7AP28-201ENST00000464513 571 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNA1P02708 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNA1P02708 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.98□□□□□ -1.61
CHRNA1P02708 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNA1P02708 RNU6-319P-201ENST00000516025 108 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNA1P02708 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNA1P02708 PSMB7P1-201ENST00000556349 514 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 AC093591.2-201ENST00000565254 3843 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNA1P02708 AL020997.2-201ENST00000602607 184 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 AC067959.1-201ENST00000604334 379 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNA1P02708 AL590410.1-201ENST00000617925 333 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHRNA1P02708 OR2L1P-202ENST00000641567 1023 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 LINC01808-202ENST00000641680 1116 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA1P02708 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNA1P02708 OR10AB1P-202ENST00000641219 1686 ntBASIC4.98□□□□□ -1.61
CHRNA1P02708 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CHRNA1P02708 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNA1P02708 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHRNA1P02708 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA1P02708 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA1P02708 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AC090017.1-201ENST00000548612 1779 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRNA1P02708 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA1P02708 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRNA1P02708 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA1P02708 RPL17P36-201ENST00000420302 549 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 RPS12P10-201ENST00000427031 377 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA1P02708 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA1P02708 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AL935212.3-201ENST00000450729 284 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AC053481.1-201ENST00000467217 306 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 AC091167.1-201ENST00000492017 396 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CHRNA1P02708 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.97□□□□□ -1.61
CHRNA1P02708 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AC084824.1-201ENST00000550917 1005 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AC025884.1-201ENST00000556034 378 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA1P02708 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.97□□□□□ -1.61
CHRNA1P02708 AL023881.1-201ENST00000621088 301 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA1P02708 A2MP1-204ENST00000566278 4130 ntBASIC4.97□□□□□ -1.61
CHRNA1P02708 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHRNA1P02708 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CHRNA1P02708 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
CHRNA1P02708 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms