Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.29□□□□□ -1.72
SCN2BO60939 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN2BO60939 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SCN2BO60939 AL512782.1-201ENST00000603093 364 ntBASIC4.29□□□□□ -1.72
SCN2BO60939 BPIFA4P-203ENST00000603168 689 ntBASIC4.29□□□□□ -1.72
SCN2BO60939 MIR7154-201ENST00000620673 73 ntBASIC4.29□□□□□ -1.72
SCN2BO60939 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SCN2BO60939 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN2BO60939 AC138627.1-204ENST00000641894 765 ntBASIC4.29□□□□□ -1.72
SCN2BO60939 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN2BO60939 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.29□□□□□ -1.72
SCN2BO60939 CPHL1P-201ENST00000461341 3407 ntBASIC4.29□□□□□ -1.72
SCN2BO60939 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.29□□□□□ -1.72
SCN2BO60939 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCN2BO60939 AL049555.1-201ENST00000562834 1933 ntBASIC4.29□□□□□ -1.72
SCN2BO60939 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN2BO60939 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCN2BO60939 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCN2BO60939 HCFC2P1-201ENST00000392864 1592 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCN2BO60939 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN2BO60939 NXPH1-205ENST00000602349 1953 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 RNA5SP22-201ENST00000365393 109 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SCN2BO60939 RNU1-63P-201ENST00000383902 164 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 RNU6-146P-201ENST00000384602 108 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.28□□□□□ -1.72
SCN2BO60939 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCN2BO60939 RNU6-603P-201ENST00000411403 107 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 AC019050.1-201ENST00000418508 492 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC062016.2-201ENST00000420950 676 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 SKP1P3-201ENST00000429280 487 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 ELOCP10-201ENST00000440624 327 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC091685.2-201ENST00000454924 864 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 AC096741.1-201ENST00000472250 846 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 AP001922.4-201ENST00000526967 290 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.28□□□□□ -1.72
SCN2BO60939 PCNPP1-201ENST00000552501 511 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC124068.1-201ENST00000563131 678 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 MTND6P33-201ENST00000571794 183 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC098935.2-201ENST00000604222 466 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 ELOCP34-201ENST00000604436 327 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 AC005084.1-201ENST00000605160 304 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SCN2BO60939 AC105105.5-201ENST00000622635 1294 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 AL592437.2-201ENST00000421655 2434 ntBASIC4.28□□□□□ -1.72
SCN2BO60939 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
SCN2BO60939 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCN2BO60939 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCN2BO60939 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.28□□□□□ -1.72
SCN2BO60939 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SCN2BO60939 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN2BO60939 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCN2BO60939 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SCN2BO60939 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SCN2BO60939 RPS24P12-201ENST00000402084 394 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 Z98745.1-201ENST00000402553 494 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 RN7SKP216-201ENST00000411050 312 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 AL160275.2-201ENST00000412010 394 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.27□□□□□ -1.73
SCN2BO60939 AC004690.1-201ENST00000418216 328 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 RPL12P34-201ENST00000424532 479 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN2BO60939 RPL12P3-201ENST00000440080 396 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 AC073648.4-201ENST00000442655 781 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 AC011753.3-201ENST00000443436 406 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 PSMC1P13-201ENST00000458195 985 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN2BO60939 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN2BO60939 AC012158.1-204ENST00000483430 465 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 RPL32P9-201ENST00000487963 407 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCN2BO60939 AC025445.1-201ENST00000502728 300 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 NDUFA5P12-201ENST00000503796 343 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
SCN2BO60939 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN2BO60939 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN2BO60939 VTA1P2-201ENST00000520205 911 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 AC125612.1-201ENST00000547580 377 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 AC069240.1-201ENST00000548774 375 ntBASIC4.27□□□□□ -1.73
SCN2BO60939 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.27□□□□□ -1.73
SCN2BO60939 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms