Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSSCA1O60232 AC074029.4-201ENST00000624796 1859 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSSCA1O60232 RNA5SP305-201ENST00000362665 119 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 RNA5SP175-201ENST00000364275 119 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 MIR765-201ENST00000390226 114 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 MIR1179-201ENST00000408703 91 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 AL391219.1-201ENST00000422570 483 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 AC087650.1-201ENST00000431445 468 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 SUMO2P1-206ENST00000445436 284 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC3.44□□□□□ -1.86
SSSCA1O60232 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.44□□□□□ -1.86
SSSCA1O60232 AC005000.1-201ENST00000536192 288 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 AC107016.1-201ENST00000550463 337 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.44□□□□□ -1.86
SSSCA1O60232 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.44□□□□□ -1.86
SSSCA1O60232 EDDM3DP-201ENST00000554692 434 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 AL109766.1-201ENST00000555080 552 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.44□□□□□ -1.86
SSSCA1O60232 AC009117.1-201ENST00000563948 554 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.44□□□□□ -1.86
SSSCA1O60232 AL139286.1-201ENST00000604465 483 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.44□□□□□ -1.86
SSSCA1O60232 AL021997.2-201ENST00000615674 271 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 AC095038.2-201ENST00000621464 1070 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSSCA1O60232 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.44□□□□□ -1.86
SSSCA1O60232 AL590763.1-201ENST00000398297 1545 ntBASIC3.44□□□□□ -1.86
SSSCA1O60232 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSSCA1O60232 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSSCA1O60232 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSSCA1O60232 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC017007.4-201ENST00000503353 1352 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 RNU6-984P-201ENST00000363236 109 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 MIR3065-201ENST00000390137 79 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 HSPD1P16-201ENST00000402302 394 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC092570.3-201ENST00000420113 693 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC234779.1-201ENST00000425910 285 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AL132765.1-201ENST00000434165 553 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.43□□□□□ -1.86
SSSCA1O60232 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 APOOP2-201ENST00000461561 539 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AC005532.2-201ENST00000467154 373 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 RPSAP50-201ENST00000481955 852 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 RN7SL808P-201ENST00000496066 299 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC109458.1-201ENST00000508858 316 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SSSCA1O60232 IGKV2-38-201ENST00000517443 247 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC090281.1-201ENST00000523019 276 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSSCA1O60232 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC063950.1-201ENST00000552036 308 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AL360157.1-201ENST00000565962 87 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AL031320.1-201ENST00000604177 357 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AL133243.1-201ENST00000614487 366 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.43□□□□□ -1.86
SSSCA1O60232 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSSCA1O60232 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.43□□□□□ -1.86
SSSCA1O60232 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.43□□□□□ -1.86
SSSCA1O60232 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.43□□□□□ -1.86
SSSCA1O60232 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSSCA1O60232 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.42□□□□□ -1.86
SSSCA1O60232 AC027287.1-201ENST00000553115 1453 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSSCA1O60232 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.42□□□□□ -1.86
SSSCA1O60232 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSSCA1O60232 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.42□□□□□ -1.86
SSSCA1O60232 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.42□□□□□ -1.86
SSSCA1O60232 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSSCA1O60232 RNU1-89P-201ENST00000384592 164 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 RN7SKP213-201ENST00000410746 298 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
SSSCA1O60232 VDAC1P6-201ENST00000430062 855 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.42□□□□□ -1.86
SSSCA1O60232 AF228730.2-201ENST00000438784 848 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.42□□□□□ -1.86
SSSCA1O60232 AL391987.1-201ENST00000441025 200 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.42□□□□□ -1.86
SSSCA1O60232 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms