Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC092170.1-201ENST00000440211 356 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AL138878.2-201ENST00000440581 1241 ntBASIC5.31□□□□□ -1.56
PROM1O43490 HMGB1P48-201ENST00000446155 598 ntBASIC5.31□□□□□ -1.56
PROM1O43490 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.31□□□□□ -1.56
PROM1O43490 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PROM1O43490 BZW1P2-201ENST00000473537 826 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.31□□□□□ -1.56
PROM1O43490 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.31□□□□□ -1.56
PROM1O43490 RNA5SP362-201ENST00000516048 118 ntBASIC5.31□□□□□ -1.56
PROM1O43490 snoU109.6-201ENST00000516831 118 ntBASIC5.31□□□□□ -1.56
PROM1O43490 RNA5SP230-201ENST00000517039 122 ntBASIC5.31□□□□□ -1.56
PROM1O43490 SEPT10P1-201ENST00000517342 1162 ntBASIC5.31□□□□□ -1.56
PROM1O43490 IGLV2-28-201ENST00000520681 304 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.31□□□□□ -1.56
PROM1O43490 PMS2P3-207ENST00000529061 717 ntBASIC5.31□□□□□ -1.56
PROM1O43490 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 AC022404.1-201ENST00000555320 273 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.31□□□□□ -1.56
PROM1O43490 AADACP1-206ENST00000561502 1193 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.31□□□□□ -1.56
PROM1O43490 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.31□□□□□ -1.56
PROM1O43490 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 AL137072.1-201ENST00000603444 466 ntBASIC5.31□□□□□ -1.56
PROM1O43490 DUXAP11-201ENST00000603858 526 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AL031281.1-201ENST00000604049 488 ntBASIC5.31□□□□□ -1.56
PROM1O43490 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 VN1R74P-201ENST00000613259 503 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC007786.3-201ENST00000615154 596 ntBASIC5.31□□□□□ -1.56
PROM1O43490 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 MIR6730-201ENST00000622213 67 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC109454.4-201ENST00000623411 649 ntBASIC5.31□□□□□ -1.56
PROM1O43490 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PROM1O43490 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
PROM1O43490 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.31□□□□□ -1.56
PROM1O43490 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.31□□□□□ -1.56
PROM1O43490 AC006042.3-201ENST00000454684 1469 ntBASIC5.31□□□□□ -1.56
PROM1O43490 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PROM1O43490 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PROM1O43490 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
PROM1O43490 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.3□□□□□ -1.56
PROM1O43490 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PROM1O43490 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PROM1O43490 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PROM1O43490 RN7SKP185-201ENST00000362813 326 ntBASIC5.3□□□□□ -1.56
PROM1O43490 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PROM1O43490 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.3□□□□□ -1.56
PROM1O43490 MIR105-2-201ENST00000385083 81 ntBASIC5.3□□□□□ -1.56
PROM1O43490 ATP5F1P3-201ENST00000397213 657 ntBASIC5.3□□□□□ -1.56
PROM1O43490 RPL23AP59-201ENST00000399415 461 ntBASIC5.3□□□□□ -1.56
PROM1O43490 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.3□□□□□ -1.56
PROM1O43490 AL355379.1-201ENST00000405542 640 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AL009179.1-201ENST00000406085 265 ntBASIC5.3□□□□□ -1.56
PROM1O43490 HMGB3P18-201ENST00000406327 590 ntBASIC5.3□□□□□ -1.56
PROM1O43490 OR3A2-201ENST00000408891 1076 ntBASIC5.3□□□□□ -1.56
PROM1O43490 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.3□□□□□ -1.56
PROM1O43490 MTCO2P16-201ENST00000436962 677 ntBASIC5.3□□□□□ -1.56
PROM1O43490 ISCA1P2-201ENST00000438679 421 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AL163193.1-201ENST00000444895 788 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.3□□□□□ -1.56
PROM1O43490 AC009961.3-201ENST00000449832 765 ntBASIC5.3□□□□□ -1.56
PROM1O43490 RNU7-140P-201ENST00000459546 60 ntBASIC5.3□□□□□ -1.56
PROM1O43490 SYPL1P1-201ENST00000473622 768 ntBASIC5.3□□□□□ -1.56
PROM1O43490 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.3□□□□□ -1.56
PROM1O43490 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.3□□□□□ -1.56
PROM1O43490 CDH12P2-201ENST00000504393 298 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AC108120.2-201ENST00000512973 294 ntBASIC5.3□□□□□ -1.56
PROM1O43490 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.3□□□□□ -1.56
PROM1O43490 snoZ278.1-201ENST00000517059 112 ntBASIC5.3□□□□□ -1.56
PROM1O43490 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 IGKV2-18-201ENST00000522607 343 ntBASIC5.3□□□□□ -1.56
PROM1O43490 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AC122688.1-201ENST00000541494 223 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.3□□□□□ -1.56
PROM1O43490 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AL359219.2-201ENST00000555184 348 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.3□□□□□ -1.56
PROM1O43490 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.3□□□□□ -1.56
PROM1O43490 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.3□□□□□ -1.56
PROM1O43490 AC135628.1-201ENST00000568867 534 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.3□□□□□ -1.56
PROM1O43490 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms