Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TRIM38O00635 ANKRD36P1-201ENST00000344424 659 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM38O00635 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM38O00635 SNORA16A-201ENST00000384342 137 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TRIM38O00635 RNA5SP339-201ENST00000390987 122 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM38O00635 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM38O00635 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM38O00635 MORF4L1P6-201ENST00000418771 268 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC005005.2-201ENST00000420779 380 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC246680.2-201ENST00000422106 389 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM38O00635 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM38O00635 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM38O00635 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM38O00635 AL031663.1-201ENST00000437445 219 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 PTGES3P1-201ENST00000439531 483 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM38O00635 AC009263.1-201ENST00000441193 1239 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC105399.1-202ENST00000447303 205 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 GAPDHP14-201ENST00000450472 937 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AL645937.3-201ENST00000453647 936 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM38O00635 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM38O00635 RN7SL447P-201ENST00000494711 245 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC023050.1-201ENST00000498198 304 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM38O00635 MTND4P2-201ENST00000507767 1203 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC008837.1-201ENST00000511513 412 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC010285.3-201ENST00000511668 676 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC010306.1-201ENST00000523223 1117 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC104417.1-201ENST00000523974 751 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC124293.1-201ENST00000530034 493 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 LRRC6P1-201ENST00000532188 885 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM38O00635 RN7SL290P-201ENST00000578661 300 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC008088.1-201ENST00000580993 280 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 NIFKP6-201ENST00000598115 845 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM38O00635 AC087763.1-201ENST00000603391 286 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC013468.1-201ENST00000608680 598 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 Mico1.1-201ENST00000611698 204 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM38O00635 AC015726.3-201ENST00000624501 418 ntBASIC5.4□□□□□ -1.54
TRIM38O00635 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM38O00635 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM38O00635 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM38O00635 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.4□□□□□ -1.55
TRIM38O00635 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM38O00635 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
TRIM38O00635 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM38O00635 AC011755.1-201ENST00000623763 2049 ntBASIC5.4□□□□□ -1.55
TRIM38O00635 AL603750.1-201ENST00000624216 1717 ntBASIC5.4□□□□□ -1.55
TRIM38O00635 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM38O00635 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM38O00635 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM38O00635 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM38O00635 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 AC144833.1-201ENST00000567953 4089 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 AC103591.2-201ENST00000265259 766 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM38O00635 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM38O00635 MIR133B-201ENST00000362210 119 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM38O00635 RNA5SP241-201ENST00000391326 114 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 MTCO2P31-201ENST00000402702 684 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM38O00635 BX119904.4-201ENST00000424402 301 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 PSMD10P3-201ENST00000437000 448 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM38O00635 TCEA1P3-201ENST00000443005 880 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 EXOSC3P1-201ENST00000448649 500 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 MTND1P27-201ENST00000451117 902 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 OR52E3P-201ENST00000452083 936 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 RN7SL188P-201ENST00000469842 285 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC005412.2-201ENST00000492004 341 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM38O00635 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM38O00635 HPRT1P1-201ENST00000509498 657 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 SNORA19.3-201ENST00000516165 130 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 FTH1P11-201ENST00000517577 551 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM38O00635 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM38O00635 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM38O00635 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM38O00635 MTATP6P15-201ENST00000527233 835 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM38O00635 NDUFS5P6-201ENST00000529136 295 ntBASIC5.39□□□□□ -1.55
TRIM38O00635 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms