Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 RNA5SP307-201ENST00000362863 116 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 RNA5SP72-201ENST00000364442 117 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC104333.2-201ENST00000422630 192 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 RPL35AP21-201ENST00000437667 333 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 RPS26P28-201ENST00000470806 348 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RGPD3A6NKT7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
RGPD3A6NKT7 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.46□□□□□ -1.53
RGPD3A6NKT7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AC023632.6-201ENST00000624338 2177 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 FCF1P5-201ENST00000406490 482 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AC062016.2-201ENST00000420950 676 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 TBCAP1-201ENST00000436520 327 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 NPM1P28-201ENST00000492269 840 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 SNORA70.24-201ENST00000517233 118 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AL442067.2-201ENST00000614033 363 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 MIR3651-201ENST00000630427 90 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 USP9YP4-201ENST00000424401 1745 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AC024560.2-201ENST00000507981 1497 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RGPD3A6NKT7 AC016588.2-201ENST00000632484 3021 ntBASIC5.46□□□□□ -1.54
RGPD3A6NKT7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 AL136164.3-201ENST00000624429 3978 ntBASIC5.45□□□□□ -1.54
RGPD3A6NKT7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 RNU6-213P-201ENST00000384051 104 ntBASIC5.45□□□□□ -1.54
RGPD3A6NKT7 SNORA57.3-201ENST00000411095 141 ntBASIC5.45□□□□□ -1.54
RGPD3A6NKT7 RPS20P14-201ENST00000412545 360 ntBASIC5.45□□□□□ -1.54
RGPD3A6NKT7 ARAFP1-201ENST00000422172 605 ntBASIC5.45□□□□□ -1.54
RGPD3A6NKT7 PPIAP13-201ENST00000434706 478 ntBASIC5.45□□□□□ -1.54
RGPD3A6NKT7 AL157385.1-201ENST00000446973 268 ntBASIC5.45□□□□□ -1.54
RGPD3A6NKT7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 SOD1P3-201ENST00000518682 454 ntBASIC5.45□□□□□ -1.54
RGPD3A6NKT7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.45□□□□□ -1.54
RGPD3A6NKT7 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 GMPSP1-201ENST00000514075 579 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 RNA5SP360-201ENST00000516555 118 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AP000641.1-201ENST00000531988 1639 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 CASC19-206ENST00000641028 1430 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AC092435.3-201ENST00000565538 3654 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms