Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR1302-11-201ENST00000408051 138 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 MIR1302-9-201ENST00000408365 138 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 MIR1302-10-201ENST00000408734 138 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RNU2-28P-201ENST00000410457 189 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 BTF3L4P3-201ENST00000418879 476 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AF228730.4-201ENST00000421457 183 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 PPIL1P1-201ENST00000423936 499 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 SDCBPP2-201ENST00000424643 885 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC092651.1-201ENST00000426110 312 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 ISCA1P6-201ENST00000427740 390 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RPS27AP6-201ENST00000427962 448 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 LSM1P1-201ENST00000438629 273 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 PCNPP2-201ENST00000441651 455 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RPL23AP16-201ENST00000441715 421 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 CXCR2P1-202ENST00000443392 1074 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RPL23AP20-201ENST00000447965 421 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC092967.1-201ENST00000449016 481 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RPL7AP71-201ENST00000451120 739 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RPS27AP3-201ENST00000453803 454 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RN7SL221P-201ENST00000466190 281 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RPL23AP12-201ENST00000467573 473 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC117522.3-201ENST00000507974 584 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 FGF7P4-201ENST00000509595 295 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RNU2-46P-201ENST00000517038 113 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AP001994.1-201ENST00000527539 826 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC087477.6-201ENST00000559595 843 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC091304.5-201ENST00000568969 158 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 MIR4637-201ENST00000582405 84 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RN7SL657P-201ENST00000582431 293 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 VN1R84P-201ENST00000593697 235 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 CKS1BP3-201ENST00000600888 237 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC087283.1-201ENST00000604029 1074 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AC092960.1-201ENST00000604762 351 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AL035413.2-201ENST00000604801 525 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 BCRP9-201ENST00000605312 388 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 MIR1302-2-201ENST00000607096 138 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 MIR193BHG-214ENST00000641765 509 ntBASIC5.67□□□□□ -1.5
SHISA3A0PJX4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHISA3A0PJX4 MAPK10-287ENST00000641217 3037 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC022031.1-201ENST00000585985 2593 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 MRE11P1-201ENST00000464884 2127 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 AC097504.1-201ENST00000515103 2415 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHISA3A0PJX4 WDR95P-201ENST00000425638 1542 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 SHQ1P1-201ENST00000437111 1544 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 GNG5P1-201ENST00000255500 204 ntBASIC5.66□□□□□ -1.5
SHISA3A0PJX4 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms