Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 ECM1P2-201ENST00000503354 1577 ntBASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TCRBV7S3A2A0A539 MTCO1P15-201ENST00000529569 1526 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 SEC63P2-201ENST00000503863 1939 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AL731566.1-201ENST00000620490 1937 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 TAS2R15P-201ENST00000390674 928 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 MTCO1P56-201ENST00000401674 224 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AL078599.1-201ENST00000402075 293 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AL357515.1-201ENST00000402967 542 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 RPS7P9-201ENST00000414704 586 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 RPL22P18-201ENST00000417197 377 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 MTND2P16-201ENST00000419987 799 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 EIF4HP2-201ENST00000424380 563 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 RPL34P6-201ENST00000432390 345 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AL591719.1-201ENST00000444669 744 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC000111.2-201ENST00000448200 210 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 FAR2P1-206ENST00000449736 709 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 OR2AF1P-201ENST00000454899 889 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 RPL7P39-201ENST00000481157 744 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 HMGN2P25-201ENST00000486956 268 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC079203.1-201ENST00000487972 404 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC072052.1-201ENST00000496556 306 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 EIF4A2P5-201ENST00000529914 499 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC023538.1-201ENST00000534576 736 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC090888.2-201ENST00000559765 1144 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC095057.3-201ENST00000567102 1157 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 ATP5F1P7-201ENST00000567330 760 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 CCDC58P3-201ENST00000590792 430 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC113368.1-201ENST00000603736 382 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AL035411.2-201ENST00000604022 421 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC025811.1-201ENST00000604312 472 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AL512329.2-201ENST00000607350 548 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC013468.1-201ENST00000608680 598 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC011330.2-201ENST00000621680 635 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 AC068057.2-201ENST00000624047 895 ntBASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TCRBV7S3A2A0A539 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 GTF2H2B-203ENST00000508065 1432 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 SNURFL-201ENST00000309296 343 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 RNU6-543P-201ENST00000362576 108 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 RNU4-51P-201ENST00000364206 140 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 RNU6-549P-201ENST00000384433 107 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 MCTS2P-201ENST00000394552 546 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AL136131.1-201ENST00000406079 803 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 HMGB3P18-201ENST00000406327 590 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 RPL12P28-201ENST00000430852 489 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AL389925.1-201ENST00000432257 728 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 MTCO2P20-201ENST00000437339 673 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AL592437.1-201ENST00000443781 492 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC244505.3-201ENST00000454598 187 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 RN7SL517P-201ENST00000462240 305 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 MTND4LP2-201ENST00000502312 285 ntBASIC5.01□□□□□ -1.61
TCRBV7S3A2A0A539 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms