Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 RNU6-707P-201ENST00000364647 95 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 OR1L1-202ENST00000373686 1083 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 RNU6-157P-201ENST00000383957 107 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL009179.1-201ENST00000406085 265 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 Y_RNA.625-201ENST00000411256 107 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 RNU6-575P-201ENST00000411326 105 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC007435.1-201ENST00000421086 415 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC113412.1-201ENST00000425840 504 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC234781.2-201ENST00000426370 994 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL009174.1-201ENST00000426577 416 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 VN1R108P-201ENST00000431580 830 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 RPL21P110-201ENST00000433345 446 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 USP9YP22-201ENST00000438971 294 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 EEF1B2P5-201ENST00000444820 548 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 REG1CP-206ENST00000447469 496 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL445669.2-201ENST00000454425 421 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 RN7SL197P-201ENST00000466981 299 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC090114.3-201ENST00000479267 829 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 CR383656.1-201ENST00000484916 377 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC104971.1-201ENST00000495117 578 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL035404.1-201ENST00000497982 568 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 MTND1P22-201ENST00000510572 951 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC026782.2-201ENST00000510845 636 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 RNU6-416P-201ENST00000516265 103 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC090819.1-201ENST00000523800 1111 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 EIF4A2P5-201ENST00000529914 499 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 NPM1P47-201ENST00000560843 856 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 VN1R84P-201ENST00000593697 235 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 SUGT1P3-202ENST00000604259 383 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC069545.1-201ENST00000605671 358 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 MIR6748-201ENST00000610433 71 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AP000676.3-201ENST00000623299 569 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC007671.2-201ENST00000637344 619 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL121839.2-201ENST00000565058 6943 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC083899.1-201ENST00000454465 3819 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 SGO1P1-201ENST00000603525 1447 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 RBPJP2-201ENST00000618187 1444 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC068870.3-201ENST00000625077 2536 ntBASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 ECM1P2-201ENST00000503354 1577 ntBASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 RNA5SP131-201ENST00000365452 119 ntBASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 BMS1P3-201ENST00000372011 932 ntBASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 SNORD116-1-201ENST00000384335 95 ntBASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 AC009804.1-201ENST00000400949 179 ntBASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 MIR1302-8-201ENST00000408342 128 ntBASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHB1Q9Y5F3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms