Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHANK2Q9UPX8 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 RPL21P65-201ENST00000406094 466 ntBASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 GOT2P5-201ENST00000433995 546 ntBASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 AC053481.4-201ENST00000583164 216 ntBASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 AC007179.3-201ENST00000604976 235 ntBASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 AC097461.1-201ENST00000568928 2821 ntBASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHANK2Q9UPX8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 RPS20P14-201ENST00000412545 360 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AC114814.2-201ENST00000419195 485 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 COX6B1P7-201ENST00000430845 235 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 MRPL50P1-201ENST00000431951 384 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AL445433.1-201ENST00000457507 257 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AC093014.1-201ENST00000548926 724 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AL160290.3-201ENST00000604869 165 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AL451086.1-201ENST00000605596 223 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AC015908.5-201ENST00000623289 343 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AC112484.5-201ENST00000624189 228 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AL356968.2-201ENST00000412769 1257 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 PDSS1P1-201ENST00000422953 1114 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 RPL23AP37-201ENST00000479658 549 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AC018816.2-201ENST00000621460 353 ntBASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.47□□□□□ -1.37
SHANK2Q9UPX8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SHANK2Q9UPX8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.46□□□□□ -1.37
SHANK2Q9UPX8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 AC007529.1-201ENST00000418574 2178 ntBASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 AL358178.1-201ENST00000407698 397 ntBASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 RPL36AP10-201ENST00000421785 322 ntBASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 RPL5P32-201ENST00000454085 879 ntBASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 MIR3200-201ENST00000580767 85 ntBASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 RN7SL435P-201ENST00000584418 282 ntBASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 VN1R92P-201ENST00000598511 928 ntBASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 CR392039.5-201ENST00000623201 510 ntBASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
SHANK2Q9UPX8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 MT-RNR1-201ENST00000389680 954 ntBASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 RNA5SP36-201ENST00000410197 133 ntBASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 RPS3AP12-201ENST00000443616 753 ntBASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 AL162151.2-201ENST00000448875 158 ntBASIC6.45□□□□□ -1.38
SHANK2Q9UPX8 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms