Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 MSL3P1-202ENST00000440028 1468 ntBASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
ZC3H4Q9UPT8 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 SNORD56.2-201ENST00000363242 71 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RNU6-1066P-201ENST00000363573 105 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RPL9P21-201ENST00000392269 505 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 MIR1203-201ENST00000408812 85 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RPS3AP3-201ENST00000411933 242 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 FCF1P2-201ENST00000415284 583 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL354751.2-201ENST00000415471 210 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC005534.2-201ENST00000431047 433 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 BMS1P19-201ENST00000433925 393 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC002553.3-201ENST00000453002 341 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 BX248409.1-201ENST00000455497 255 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RN7SL834P-201ENST00000461450 286 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 UBFD1P1-201ENST00000473259 814 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RPS4XP23-201ENST00000487801 237 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RPL15P21-201ENST00000495592 567 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC109635.6-201ENST00000525487 1113 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC022404.1-201ENST00000555320 273 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC233702.7-202ENST00000582941 211 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC007363.1-201ENST00000604736 620 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL513218.1-201ENST00000606527 391 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC091768.1-201ENST00000609258 930 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 MIR6793-201ENST00000612376 63 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC118658.2-201ENST00000618697 459 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 ZNF37BP-203ENST00000452306 1352 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC079097.1-201ENST00000512187 1399 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL596244.1-201ENST00000567068 3779 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 Y_RNA.279-201ENST00000364763 95 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RNU6-483P-201ENST00000384088 108 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 U8.14-201ENST00000390843 143 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 OR2W4P-201ENST00000406496 926 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RN7SKP281-201ENST00000410472 352 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL355433.1-201ENST00000422804 300 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AP001324.1-201ENST00000428553 399 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL513175.1-201ENST00000431492 780 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RPL21P110-201ENST00000433345 446 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RPL37P21-201ENST00000435890 276 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 PSMC1P13-201ENST00000458195 985 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 RPL32P9-201ENST00000487963 407 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 HMGB1P29-201ENST00000505659 499 ntBASIC7.78□□□□□ -1.16
ZC3H4Q9UPT8 AC010493.1-201ENST00000513479 292 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms