Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 TRY2P-201ENST00000448860 689 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC022431.1-201ENST00000450941 438 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 HMGB1P5-202ENST00000451497 985 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 BET1P1-201ENST00000482276 359 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC091435.1-201ENST00000505442 584 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 MTND1P22-201ENST00000510572 951 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC008837.1-201ENST00000511513 412 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 MTCO1P47-201ENST00000523889 1271 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC104417.1-201ENST00000523974 751 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 HMGB1P40-201ENST00000525121 540 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC011611.5-201ENST00000552477 578 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 MTND4LP24-201ENST00000572277 291 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AP005403.1-201ENST00000579720 229 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 Z99497.2-201ENST00000603634 310 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AL512329.2-201ENST00000607350 548 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 RPL23AP61-201ENST00000623642 466 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC005618.4-201ENST00000625053 554 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC073869.8-201ENST00000641806 335 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC004076.2-201ENST00000620532 3323 ntBASIC5.47□□□□□ -1.53
DKK3Q9UBP4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
DKK3Q9UBP4 AC007938.2-201ENST00000604666 2634 ntBASIC5.46□□□□□ -1.53
DKK3Q9UBP4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
DKK3Q9UBP4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
DKK3Q9UBP4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
DKK3Q9UBP4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC092681.1-201ENST00000297369 291 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC017079.1-201ENST00000333650 415 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 SNORD116-1-201ENST00000384335 95 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 SNORD116-12-201ENST00000384468 92 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 CHMP1B2P-201ENST00000399581 597 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AL133388.1-201ENST00000404509 287 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 ETF1P3-201ENST00000430422 1160 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 MTCO3P5-201ENST00000433620 714 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC023512.1-201ENST00000444513 499 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 PTMAP3-201ENST00000447474 330 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AL606490.1-201ENST00000452266 765 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC004815.1-201ENST00000484185 331 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 RPS21P4-201ENST00000487122 248 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC108120.2-201ENST00000512973 294 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 GCSHP4-201ENST00000538792 439 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC005341.1-201ENST00000571086 708 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 MIR3936-201ENST00000584304 110 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AL358072.1-201ENST00000604156 575 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC007349.4-201ENST00000608114 532 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AL139124.1-201ENST00000609123 421 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 MIR7155-201ENST00000615925 56 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 uc_338.7-201ENST00000621834 124 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 AC074101.1-201ENST00000637861 241 ntBASIC5.46□□□□□ -1.54
DKK3Q9UBP4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
DKK3Q9UBP4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms