Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 RNA5SP22-201ENST00000365393 109 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 DYNLL1P7-201ENST00000429273 258 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 AC114495.1-201ENST00000441274 436 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 AC093824.1-201ENST00000508796 343 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 NPM1P41-201ENST00000512920 831 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 AC090515.3-201ENST00000560431 315 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 AC007224.1-201ENST00000564410 144 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 AP002360.3-201ENST00000607673 710 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 OR7M1P-201ENST00000608946 533 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 SCN1A-220ENST00000641603 12506 ntBASIC4.2□□□□□ -1.74
CCDC88CQ9P219 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC88CQ9P219 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 RNU4-39P-201ENST00000362455 127 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 RPS16P5-201ENST00000406501 404 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 RPS20P14-201ENST00000412545 360 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 SETP15-201ENST00000412724 337 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AL139095.3-201ENST00000419672 1203 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 RPL23AP52-201ENST00000439311 478 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 RPL7P33-201ENST00000444159 742 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 EIF2S2P2-201ENST00000447161 982 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AC025554.1-201ENST00000505641 188 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 RN7SKP122-201ENST00000515923 296 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 PARP1P2-201ENST00000556806 195 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AC093765.1-201ENST00000603758 881 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 Z82217.1-201ENST00000625157 8149 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 OR5P1P-201ENST00000299512 925 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 MIR134-201ENST00000385258 73 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AL590762.2-201ENST00000395798 571 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 RPS12P10-201ENST00000427031 377 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AC073587.1-201ENST00000447093 876 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AC012671.1-201ENST00000451912 203 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 PRELID3BP5-201ENST00000508612 460 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AC136624.4-201ENST00000573044 370 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AC026979.4-201ENST00000606555 645 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 AL445423.1-201ENST00000609941 536 ntBASIC4.19□□□□□ -1.74
CCDC88CQ9P219 HSPD1P14-201ENST00000432666 1618 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 CPHL1P-201ENST00000461341 3407 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 RNA5SP479-201ENST00000364858 117 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 MIR3065-201ENST00000390137 79 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 FCF1P5-201ENST00000406490 482 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 RN7SKP263-201ENST00000411194 309 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 AL157831.1-201ENST00000426134 473 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 VDAC1P6-201ENST00000430062 855 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 NPM1P29-201ENST00000483112 803 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 AC134698.5-201ENST00000519444 336 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 MIR6716-201ENST00000613413 80 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 AC105105.5-201ENST00000622635 1294 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 LINC01808-202ENST00000641680 1116 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 MAPK10-304ENST00000641341 3984 ntBASIC4.18□□□□□ -1.74
CCDC88CQ9P219 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms