Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 MIR6820-201ENST00000611508 62 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 CYCSP41-201ENST00000616920 296 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 AC009159.2-201ENST00000617603 606 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 AL512427.1-201ENST00000618593 349 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 AC006963.1-201ENST00000624003 1052 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 AC068057.2-201ENST00000624047 895 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 AP000648.2-201ENST00000624182 404 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 AC011815.3-201ENST00000624194 473 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 AC135068.12-201ENST00000637370 931 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 SEPT7P7-201ENST00000420492 1301 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 MAPK10-263ENST00000641052 4307 ntBASIC5.18□□□□□ -1.58
NCKIPSDQ9NZQ3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 CASC19-284ENST00000642142 1868 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 RN7SKP115-201ENST00000363177 317 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 RNU6-452P-201ENST00000384406 107 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MIR600-201ENST00000385007 98 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MIR320B1-201ENST00000390209 79 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AL035419.1-201ENST00000397037 564 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AL078599.1-201ENST00000402075 293 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 OR4K12P-201ENST00000406538 961 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MTCO3P4-201ENST00000419236 787 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 OR6C64P-201ENST00000419708 825 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC097499.1-201ENST00000444277 208 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MTND1P31-201ENST00000449206 961 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 HMGB1P26-201ENST00000452520 628 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC104634.1-201ENST00000452720 462 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 RPL35AP28-201ENST00000459730 331 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 RN7SL189P-201ENST00000468631 289 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC090114.3-201ENST00000479267 829 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MTND2P38-201ENST00000522536 667 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 NPM1P35-201ENST00000533043 868 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AP000916.1-201ENST00000533869 835 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC087894.1-201ENST00000538359 518 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MTND3P12-201ENST00000559068 328 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AL109741.3-201ENST00000561748 592 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC106734.1-201ENST00000568646 663 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MIR3934-201ENST00000579806 107 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC011487.3-201ENST00000593607 453 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC093875.1-201ENST00000623688 504 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AC024023.1-201ENST00000624530 922 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AL590396.4-201ENST00000636779 956 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 PANDAR-201ENST00000629595 1506 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 AP005432.1-201ENST00000580891 3485 ntBASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NCKIPSDQ9NZQ3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 ZNF29P-201ENST00000225587 168 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AP002784.2-201ENST00000397300 549 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AL355615.1-201ENST00000406187 641 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC096533.1-201ENST00000411645 353 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms