Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RNU1-43P-201ENST00000365052 165 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RPS24P12-201ENST00000402084 394 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 HSPD1P16-201ENST00000402302 394 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RN7SKP293-201ENST00000411389 296 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RPL30P3-201ENST00000424262 333 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 DYNLL1P7-201ENST00000429273 258 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 PRPF38AP2-201ENST00000438179 851 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RPL34P26-201ENST00000445636 354 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC000111.2-201ENST00000448200 210 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RN7SL727P-201ENST00000482164 296 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RN7SL97P-201ENST00000486780 299 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC107398.1-201ENST00000486904 505 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RN7SL244P-201ENST00000493405 297 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC023050.1-201ENST00000498198 304 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC010285.3-201ENST00000511668 676 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RNU6-889P-201ENST00000517189 103 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 OR4A46P-201ENST00000527255 933 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 OR7E128P-201ENST00000532736 1024 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 MIR5010-201ENST00000582846 120 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 NF1P5-201ENST00000588287 448 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 MIR7154-201ENST00000620673 73 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 MIR6837-201ENST00000620884 64 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AC015726.3-201ENST00000624501 418 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AP000843.1-201ENST00000624880 701 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AL353662.3-201ENST00000625131 237 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 OR2L1P-202ENST00000641567 1023 ntBASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.14□□□□□ -1.91
SND1-IT1Q9HBX3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 Z98755.1-201ENST00000407015 1384 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 RNU6-317P-201ENST00000384031 107 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 RNU6-452P-201ENST00000384406 107 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 ATP5F1P2-201ENST00000398143 760 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 Z97832.1-201ENST00000402490 328 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 DUTP5-201ENST00000406790 469 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 IPMKP1-201ENST00000425988 855 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 RWDD4P2-201ENST00000426392 563 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 RPS17P8-201ENST00000434525 335 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 CEACAMP1-201ENST00000434624 1035 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AC026348.1-201ENST00000462549 1053 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AC006967.1-201ENST00000467608 589 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AC097484.1-201ENST00000471148 389 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 HMGN2P25-201ENST00000486956 268 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 RWDD4P1-201ENST00000488019 565 ntBASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AK6-203ENST00000502819 743 ntTSL 5 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.13□□□□□ -1.91
SND1-IT1Q9HBX3 PPBPP1-201ENST00000510807 373 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms