Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 RNU1-108P-201ENST00000362556 161 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 SNORA70.2-201ENST00000364506 135 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 MIR298-201ENST00000401212 88 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 PTP4A1P1-201ENST00000420539 515 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 ARAFP1-201ENST00000422172 605 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 RPS6P2-201ENST00000454208 705 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AC096741.1-201ENST00000472250 846 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 RPL23AP97-201ENST00000568955 471 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 MTND6P33-201ENST00000571794 183 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 MIR1254-2-201ENST00000579553 63 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AL008729.2-201ENST00000606393 473 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AC019193.2-201ENST00000610012 634 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AL669942.2-201ENST00000620352 697 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 MIR6758-201ENST00000620653 63 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 OR2L1P-202ENST00000641567 1023 ntBASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LRTM1Q9HBL6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
LRTM1Q9HBL6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 RNU1-15P-201ENST00000353977 144 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 P2RY10P2-201ENST00000416730 913 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 RPS27AP17-201ENST00000463344 455 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 NIP7P2-201ENST00000485801 544 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 SLC25A15P5-201ENST00000508033 253 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AC015795.1-201ENST00000513669 327 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AC134698.5-201ENST00000519444 336 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AL034374.2-201ENST00000605281 548 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AC083809.1-201ENST00000615051 472 ntBASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LRTM1Q9HBL6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 RNU1-94P-201ENST00000362627 173 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 RN7SKP224-201ENST00000364140 325 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 MIR659-201ENST00000384963 97 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 SNORA68.2-201ENST00000391263 128 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 RNA5SP397-201ENST00000391323 118 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 RPS20P14-201ENST00000412545 360 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 NPM1P26-201ENST00000426339 738 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 AP001324.1-201ENST00000428553 399 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 AL359265.2-201ENST00000434367 631 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 MAPRE1P3-201ENST00000435438 796 ntBASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.26□□□□□ -1.73
LRTM1Q9HBL6 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms