Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 NIFKP7-201ENST00000503365 834 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 RNA5SP96-201ENST00000516041 107 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 CARSP2-201ENST00000520688 277 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 MIR5186-201ENST00000577504 120 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC022432.1-201ENST00000595739 310 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC024085.1-201ENST00000604299 432 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC007621.1-201ENST00000604544 437 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC091193.1-201ENST00000604640 448 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AL136363.1-201ENST00000605349 337 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC068726.1-201ENST00000610993 341 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC006504.8-201ENST00000621046 635 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AL732618.1-201ENST00000623251 301 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 AC005332.9-201ENST00000620266 2921 ntBASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
BHLHE41Q9C0J9 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 MKI67P1-201ENST00000604297 1460 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC003973.3-201ENST00000624863 2822 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RNA5SP302-201ENST00000364896 100 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RNA5SP35-201ENST00000391257 129 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RN7SKP266-201ENST00000410232 287 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RNA5SP118-201ENST00000410385 109 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RANP6-201ENST00000413691 644 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RPS24P8-201ENST00000431490 402 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 OR52B5P-201ENST00000435337 951 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RPL7P54-201ENST00000438336 674 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 PFN1P11-201ENST00000445829 389 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AL672138.1-201ENST00000450604 1015 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RBMY2TP-201ENST00000451162 947 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 TREML3P-201ENST00000457327 501 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC092824.1-201ENST00000483524 576 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RPL21P42-201ENST00000488408 464 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC013356.1-201ENST00000489027 564 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RPL19P11-201ENST00000495944 589 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC093325.1-201ENST00000508378 326 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC091849.1-201ENST00000509920 121 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 RPL7L1P7-201ENST00000509986 724 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 IGKV2-36-201ENST00000519999 223 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AF279873.1-201ENST00000523393 313 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC090424.1-201ENST00000535243 736 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC090502.2-201ENST00000549267 280 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AC012065.3-201ENST00000602736 439 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AL162730.1-201ENST00000605734 292 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 MIR98-201ENST00000606724 119 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.3□□□□□ -1.4
BHLHE41Q9C0J9 MRPL57P3-201ENST00000619218 176 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms