Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 AC112255.1-201ENST00000624070 2493 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 NAMPTP1-201ENST00000440465 2514 ntBASIC6.22□□□□□ -1.41
FOXP3Q9BZS1 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
FOXP3Q9BZS1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.41
FOXP3Q9BZS1 MTCO1P6-201ENST00000481192 1384 ntBASIC6.21□□□□□ -1.41
FOXP3Q9BZS1 LYARP1-201ENST00000436977 1501 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 COX6B1P3-201ENST00000312310 260 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 SNORA4.1-201ENST00000364263 144 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 RNU6-259P-201ENST00000383999 107 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC004386.1-201ENST00000393214 761 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 METTL15P3-201ENST00000415522 1221 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 RPS29P14-201ENST00000431518 171 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC098614.3-201ENST00000438957 440 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AL645936.1-201ENST00000441979 518 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 MTND2P24-201ENST00000453434 806 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 RANP1-206ENST00000455094 651 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 ACTG1P13-201ENST00000486987 1043 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 RPL12P30-201ENST00000488389 499 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 RN7SL284P-201ENST00000498823 275 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 SETP21-201ENST00000514799 892 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 RN7SKP35-201ENST00000517210 151 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC087808.1-201ENST00000520501 361 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 OR4C2P-201ENST00000530855 1064 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AP001804.2-201ENST00000533932 910 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 OR7K1P-201ENST00000546439 926 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AL121579.1-201ENST00000555129 305 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 OR11J2P-201ENST00000555298 907 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 NIFKP8-201ENST00000560500 874 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 RN7SL753P-201ENST00000581238 290 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC011453.2-201ENST00000603737 729 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 BNIP3P4-201ENST00000604946 565 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC010857.1-201ENST00000606398 594 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC138932.5-201ENST00000617759 563 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC069209.1-201ENST00000619282 651 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC092794.2-201ENST00000620933 563 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 AC109315.1-201ENST00000584143 1347 ntBASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
FOXP3Q9BZS1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 RNA5SP435-201ENST00000364044 108 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 U3.10-201ENST00000364459 214 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 RNU105B-201ENST00000364478 208 ntBASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.2□□□□□ -1.42
FOXP3Q9BZS1 RNU6-761P-201ENST00000384148 107 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms