Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC139495.1-202ENST00000513164 354 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 MTATP6P1-201ENST00000514057 681 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RNA5SP362-201ENST00000516048 118 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RNU6-491P-201ENST00000516099 110 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 RN7SKP34-201ENST00000516142 244 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 OR10G5P-201ENST00000532733 358 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC133555.2-201ENST00000550213 292 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 HMGB3P26-201ENST00000560051 582 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 CYP4A43P-201ENST00000568156 121 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 MIR3614-201ENST00000581261 86 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 QTRT1P1-201ENST00000604344 1078 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AL139286.1-201ENST00000604465 483 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AL159169.2-201ENST00000610061 1269 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 CASC19-222ENST00000641321 1173 ntBASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC28BQ9BUN5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC107977.1-201ENST00000355745 939 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 RN7SKP115-201ENST00000363177 317 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 SNORA74A-201ENST00000364089 198 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 RNA5SP22-201ENST00000365393 109 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 UBE2V1P15-201ENST00000407776 448 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 OR3A2-201ENST00000408891 1076 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AL590609.2-201ENST00000421430 368 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 FAR2P1-206ENST00000449736 709 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AL353718.1-201ENST00000451028 517 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AL136520.1-202ENST00000555494 763 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC090079.2-201ENST00000575289 768 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC023762.1-201ENST00000603280 584 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC020910.3-201ENST00000603701 874 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AL512329.2-201ENST00000607350 548 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC006213.4-201ENST00000616184 634 ntBASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC28BQ9BUN5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 RNU1-82P-201ENST00000390851 165 ntBASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 SNORA17A-201ENST00000391185 133 ntBASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 RN7SKP167-201ENST00000411047 285 ntBASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 MTCO1P45-201ENST00000431457 267 ntBASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 RPL17P35-201ENST00000432217 549 ntBASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 HLA-N-201ENST00000437516 135 ntBASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 GSTA7P-201ENST00000438425 448 ntBASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 RPS27AP15-201ENST00000447672 466 ntBASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC28BQ9BUN5 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms