Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX3Q99909 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX3Q99909 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX3Q99909 PCNAP1-202ENST00000595299 752 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AC069304.3-201ENST00000603938 1084 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AC018618.2-201ENST00000604770 446 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 AC126915.2-201ENST00000610957 190 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AL121612.2-201ENST00000612261 482 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX3Q99909 AC097460.3-201ENST00000623099 442 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AP000648.2-201ENST00000624182 404 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 OR52B5P-202ENST00000641118 1110 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX3Q99909 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 AC011493.1-201ENST00000596753 1632 ntBASIC4.34□□□□□ -1.71
SSX3Q99909 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX3Q99909 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX3Q99909 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX3Q99909 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
SSX3Q99909 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SSX3Q99909 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.34□□□□□ -1.72
SSX3Q99909 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.33□□□□□ -1.72
SSX3Q99909 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SSX3Q99909 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
SSX3Q99909 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSX3Q99909 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX3Q99909 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.33□□□□□ -1.72
SSX3Q99909 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX3Q99909 RNA5SP28-201ENST00000363841 119 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 SNORA74A-201ENST00000364089 198 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 OR6K3-202ENST00000368146 996 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 MIR105-1-201ENST00000385222 81 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SSX3Q99909 SPTLC1P2-201ENST00000407089 121 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.33□□□□□ -1.72
SSX3Q99909 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.33□□□□□ -1.72
SSX3Q99909 RPL36AP10-201ENST00000421785 322 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 AC108075.1-201ENST00000424692 529 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AC093655.2-201ENST00000425735 631 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AL031736.2-201ENST00000426573 787 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX3Q99909 AC097499.1-201ENST00000444277 208 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX3Q99909 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX3Q99909 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 FAR2P1-206ENST00000449736 709 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX3Q99909 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.33□□□□□ -1.72
SSX3Q99909 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX3Q99909 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX3Q99909 AC078857.1-201ENST00000469870 667 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 RPS18P6-201ENST00000476880 458 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX3Q99909 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX3Q99909 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SSX3Q99909 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX3Q99909 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SSX3Q99909 OR8G3P-201ENST00000533406 921 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.33□□□□□ -1.72
SSX3Q99909 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX3Q99909 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.33□□□□□ -1.72
SSX3Q99909 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX3Q99909 POLR2KP1-201ENST00000553226 168 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 RPL10P14-201ENST00000565265 298 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX3Q99909 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX3Q99909 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 AF230666.2-201ENST00000602328 725 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 ABI1P1-201ENST00000603375 1120 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AC010680.3-201ENST00000604215 520 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AL158211.2-201ENST00000607282 395 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 AC016769.4-201ENST00000616893 535 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.33□□□□□ -1.72
SSX3Q99909 CYP4F35P-202ENST00000636121 390 ntBASIC4.33□□□□□ -1.72
SSX3Q99909 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX3Q99909 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
SSX3Q99909 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX3Q99909 PANDAR-201ENST00000629595 1506 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SSX3Q99909 SCARNA15-201ENST00000607520 4325 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 MTND4P26-201ENST00000415971 1359 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 MTND4P31-201ENST00000425607 1343 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms