Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.5□□□□□ -1.53
SMOQ99835 YWHAEP5-201ENST00000431545 765 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 AL445669.2-201ENST00000454425 421 ntBASIC5.5□□□□□ -1.53
SMOQ99835 CDC42P1-201ENST00000456658 548 ntBASIC5.5□□□□□ -1.53
SMOQ99835 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.5□□□□□ -1.53
SMOQ99835 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 AC090114.3-201ENST00000479267 829 ntBASIC5.5□□□□□ -1.53
SMOQ99835 RN7SL814P-201ENST00000487715 300 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AC022133.1-201ENST00000490961 571 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 IMPA1P1-201ENST00000510718 842 ntBASIC5.5□□□□□ -1.53
SMOQ99835 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 HMGB1P1-201ENST00000522557 636 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 AC010306.1-201ENST00000523223 1117 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 DUX4L52-201ENST00000549363 777 ntBASIC5.5□□□□□ -1.53
SMOQ99835 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.5□□□□□ -1.53
SMOQ99835 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 AC051619.2-201ENST00000559063 397 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 AC095057.3-201ENST00000567102 1157 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.5□□□□□ -1.53
SMOQ99835 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.5□□□□□ -1.53
SMOQ99835 AL121612.2-201ENST00000612261 482 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AL392048.1-201ENST00000613946 534 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AC139769.3-201ENST00000618383 175 ntBASIC5.5□□□□□ -1.53
SMOQ99835 AC099494.2-201ENST00000623371 978 ntBASIC5.5□□□□□ -1.53
SMOQ99835 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.5□□□□□ -1.53
SMOQ99835 AC135068.12-201ENST00000637370 931 ntBASIC5.5□□□□□ -1.53
SMOQ99835 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 BX005019.1-201ENST00000561881 1810 ntBASIC5.5□□□□□ -1.53
SMOQ99835 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMOQ99835 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.5□□□□□ -1.53
SMOQ99835 MRRFP1-201ENST00000435941 1675 ntBASIC5.5□□□□□ -1.53
SMOQ99835 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SMOQ99835 AC023421.1-201ENST00000590535 1785 ntBASIC5.5□□□□□ -1.53
SMOQ99835 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.49□□□□□ -1.53
SMOQ99835 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.49□□□□□ -1.53
SMOQ99835 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 METTL21EP-201ENST00000298105 713 ntBASIC5.49□□□□□ -1.53
SMOQ99835 RN7SKP153-201ENST00000365026 316 ntBASIC5.49□□□□□ -1.53
SMOQ99835 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SMOQ99835 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 RNU6-452P-201ENST00000384406 107 ntBASIC5.49□□□□□ -1.53
SMOQ99835 OR8V1P-201ENST00000395193 873 ntBASIC5.49□□□□□ -1.53
SMOQ99835 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.49□□□□□ -1.53
SMOQ99835 AC211486.3-201ENST00000412694 621 ntBASIC5.49□□□□□ -1.53
SMOQ99835 RPL23AP27-201ENST00000415161 451 ntBASIC5.49□□□□□ -1.53
SMOQ99835 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.49□□□□□ -1.53
SMOQ99835 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 Z75741.2-201ENST00000417272 1167 ntBASIC5.49□□□□□ -1.53
SMOQ99835 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 AC027644.1-201ENST00000419595 298 ntBASIC5.49□□□□□ -1.53
SMOQ99835 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.49□□□□□ -1.53
SMOQ99835 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.49□□□□□ -1.53
SMOQ99835 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 RPL19P16-201ENST00000433839 588 ntBASIC5.49□□□□□ -1.53
SMOQ99835 MTCO1P52-201ENST00000433928 531 ntBASIC5.49□□□□□ -1.53
SMOQ99835 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.49□□□□□ -1.53
SMOQ99835 GSTA7P-201ENST00000438425 448 ntBASIC5.49□□□□□ -1.53
SMOQ99835 THAP5P1-201ENST00000439089 262 ntBASIC5.49□□□□□ -1.53
SMOQ99835 RPS29P10-201ENST00000439197 166 ntBASIC5.49□□□□□ -1.53
SMOQ99835 MTND1P29-201ENST00000448112 647 ntBASIC5.49□□□□□ -1.53
SMOQ99835 AC104978.1-201ENST00000449387 391 ntBASIC5.49□□□□□ -1.53
SMOQ99835 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 RPSAP50-201ENST00000481955 852 ntBASIC5.49□□□□□ -1.53
SMOQ99835 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 AC091435.1-201ENST00000505442 584 ntBASIC5.49□□□□□ -1.53
SMOQ99835 PRELID3BP4-201ENST00000515476 571 ntBASIC5.49□□□□□ -1.53
SMOQ99835 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SMOQ99835 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.49□□□□□ -1.53
SMOQ99835 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.49□□□□□ -1.53
SMOQ99835 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.49□□□□□ -1.53
SMOQ99835 AC044860.2-201ENST00000561005 179 ntBASIC5.49□□□□□ -1.53
SMOQ99835 MTCYBP33-201ENST00000575007 1130 ntBASIC5.49□□□□□ -1.53
SMOQ99835 RN7SL708P-201ENST00000580952 299 ntBASIC5.49□□□□□ -1.53
SMOQ99835 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.49□□□□□ -1.53
SMOQ99835 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 AL583856.2-201ENST00000606298 543 ntBASIC5.49□□□□□ -1.53
SMOQ99835 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms