Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NOTCH4Q99466 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.85□□□□□ -1.63
NOTCH4Q99466 AC113398.2-201ENST00000507630 558 ntBASIC4.85□□□□□ -1.63
NOTCH4Q99466 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.85□□□□□ -1.63
NOTCH4Q99466 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.85□□□□□ -1.63
NOTCH4Q99466 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.85□□□□□ -1.63
NOTCH4Q99466 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NOTCH4Q99466 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.85□□□□□ -1.63
NOTCH4Q99466 AL049830.4-201ENST00000555149 351 ntBASIC4.85□□□□□ -1.63
NOTCH4Q99466 AGGF1P9-201ENST00000561884 913 ntBASIC4.85□□□□□ -1.63
NOTCH4Q99466 KPNA2P3-201ENST00000584190 848 ntBASIC4.85□□□□□ -1.63
NOTCH4Q99466 AL109618.2-201ENST00000605527 211 ntBASIC4.85□□□□□ -1.63
NOTCH4Q99466 AC090948.1-201ENST00000607464 549 ntBASIC4.85□□□□□ -1.63
NOTCH4Q99466 AL445493.3-201ENST00000619568 477 ntBASIC4.85□□□□□ -1.63
NOTCH4Q99466 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NOTCH4Q99466 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC4.85□□□□□ -1.63
NOTCH4Q99466 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.85□□□□□ -1.63
NOTCH4Q99466 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.85□□□□□ -1.63
NOTCH4Q99466 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.85□□□□□ -1.63
NOTCH4Q99466 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NOTCH4Q99466 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 AL121950.1-201ENST00000624993 2077 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 RNA5SP509-201ENST00000364577 119 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 RPL7AP25-201ENST00000423357 805 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 FTH1P16-201ENST00000435241 552 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 MTND1P1-201ENST00000445453 368 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 AC009963.2-201ENST00000453431 138 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 SNORD11.1-201ENST00000459482 85 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 MTND4LP2-201ENST00000502312 285 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 CCNHP1-201ENST00000513311 678 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 AL591034.3-201ENST00000605511 685 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 AC005332.10-201ENST00000612725 619 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 AC231759.1-201ENST00000616455 597 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 AC078880.5-201ENST00000617845 421 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 AL137918.1-201ENST00000624542 1922 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NOTCH4Q99466 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.84□□□□□ -1.63
NOTCH4Q99466 AC090017.1-201ENST00000548612 1779 ntBASIC4.84□□□□□ -1.63
NOTCH4Q99466 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NOTCH4Q99466 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
NOTCH4Q99466 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 SNORD116-8-201ENST00000384365 95 ntBASIC4.84□□□□□ -1.64
NOTCH4Q99466 OR6C69P-201ENST00000394268 893 ntBASIC4.84□□□□□ -1.64
NOTCH4Q99466 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NOTCH4Q99466 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 AL035246.1-201ENST00000433554 1255 ntBASIC4.84□□□□□ -1.64
NOTCH4Q99466 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NOTCH4Q99466 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 DUXAP8-207ENST00000456786 622 ntBASIC4.84□□□□□ -1.64
NOTCH4Q99466 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
NOTCH4Q99466 AC011352.1-201ENST00000512300 793 ntBASIC4.84□□□□□ -1.64
NOTCH4Q99466 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 MTND3P13-201ENST00000574391 343 ntBASIC4.84□□□□□ -1.64
NOTCH4Q99466 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 DUXAP10-204ENST00000612052 616 ntBASIC4.84□□□□□ -1.64
NOTCH4Q99466 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.84□□□□□ -1.64
NOTCH4Q99466 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NOTCH4Q99466 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NOTCH4Q99466 VN2R3P-201ENST00000422626 1412 ntBASIC4.83□□□□□ -1.64
NOTCH4Q99466 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.83□□□□□ -1.64
NOTCH4Q99466 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.83□□□□□ -1.64
NOTCH4Q99466 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NOTCH4Q99466 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NOTCH4Q99466 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NOTCH4Q99466 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
NOTCH4Q99466 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
NOTCH4Q99466 ZNF29P-201ENST00000225587 168 ntBASIC4.83□□□□□ -1.64
NOTCH4Q99466 AC021146.4-201ENST00000309229 279 ntBASIC4.83□□□□□ -1.64
NOTCH4Q99466 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NOTCH4Q99466 SNORD116-1-201ENST00000384335 95 ntBASIC4.83□□□□□ -1.64
NOTCH4Q99466 MIR134-201ENST00000385258 73 ntBASIC4.83□□□□□ -1.64
NOTCH4Q99466 AL583835.1-201ENST00000399570 407 ntBASIC4.83□□□□□ -1.64
NOTCH4Q99466 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NOTCH4Q99466 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.83□□□□□ -1.64
NOTCH4Q99466 E2F6P2-201ENST00000420708 748 ntBASIC4.83□□□□□ -1.64
NOTCH4Q99466 RAD23BP1-201ENST00000421404 1227 ntBASIC4.83□□□□□ -1.64
NOTCH4Q99466 GAPDHP49-201ENST00000421421 961 ntBASIC4.83□□□□□ -1.64
NOTCH4Q99466 RPS29P17-201ENST00000430795 166 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms