Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AC016397.1-201ENST00000412463 242 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 GNG5P5-201ENST00000420444 220 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AC016712.1-201ENST00000431088 378 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 H2AFZP6-201ENST00000444403 394 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AC009963.2-201ENST00000453431 138 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 RPS20P4-201ENST00000461659 355 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AC018552.1-201ENST00000562099 811 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AL023583.1-201ENST00000607518 1143 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 FAM27D1-201ENST00000612308 341 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 AL449283.1-201ENST00000602631 3403 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AP001273.1-201ENST00000624493 3152 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC093849.1-201ENST00000563631 2209 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 FAM3C2-201ENST00000312214 681 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC126755.2-208ENST00000327792 462 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC138969.1-213ENST00000331436 462 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 RNA5SP366-201ENST00000365454 123 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 MIR1179-201ENST00000408703 91 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 RPL23AP26-201ENST00000412728 464 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 CHIAP3-201ENST00000423668 1133 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC009220.1-201ENST00000451614 275 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC109327.1-201ENST00000471666 403 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 RPS29P19-201ENST00000479709 171 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 TVP23BP1-201ENST00000557500 617 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC027176.2-201ENST00000559166 746 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AL390726.5-202ENST00000564800 256 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AF230666.2-201ENST00000602328 725 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC016590.3-201ENST00000611171 753 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC055839.1-201ENST00000634467 498 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 AC099654.3-201ENST00000447087 1546 ntBASIC3.54□□□□□ -1.84
GAFA1Q96PS6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.54□□□□□ -1.84
GAFA1Q96PS6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
GAFA1Q96PS6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
GAFA1Q96PS6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
GAFA1Q96PS6 AC027290.2-201ENST00000623210 18662 ntBASIC3.53□□□□□ -1.84
GAFA1Q96PS6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
GAFA1Q96PS6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
GAFA1Q96PS6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GAFA1Q96PS6 MIR141-201ENST00000384975 95 ntBASIC3.53□□□□□ -1.84
GAFA1Q96PS6 AL161909.1-201ENST00000397390 712 ntBASIC3.53□□□□□ -1.84
GAFA1Q96PS6 AL035696.2-201ENST00000407941 709 ntBASIC3.53□□□□□ -1.84
GAFA1Q96PS6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.53□□□□□ -1.84
GAFA1Q96PS6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms