Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTP4Q96DX8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTP4Q96DX8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTP4Q96DX8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC083843.2-201ENST00000568248 6253 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTP4Q96DX8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTP4Q96DX8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTP4Q96DX8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 MIR16-2-201ENST00000362117 81 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTP4Q96DX8 SEPT7P8-201ENST00000413308 775 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 RANP4-201ENST00000413361 655 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 LINC00993-201ENST00000420453 540 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 RPL7P57-201ENST00000423238 740 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 RPS17P8-201ENST00000434525 335 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC104651.2-201ENST00000447549 528 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 NPM1P29-201ENST00000483112 803 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 RN7SL591P-201ENST00000496150 292 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 PPM1AP1-201ENST00000502740 1135 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 BOLA3P3-201ENST00000505182 232 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 SNORA19.3-201ENST00000516165 130 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 RN7SKP287-201ENST00000516546 266 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC068993.1-201ENST00000546724 589 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 FKBP1BP1-201ENST00000553366 325 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 EDDM3DP-201ENST00000554692 434 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AF230666.2-201ENST00000602328 725 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC006363.1-201ENST00000603806 463 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC093424.1-201ENST00000604999 338 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AP001521.2-201ENST00000608772 546 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC097505.1-201ENST00000610199 565 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC087385.3-201ENST00000620477 187 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC138907.10-201ENST00000623708 983 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AL590396.4-201ENST00000636779 956 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC092111.2-201ENST00000611627 1414 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AC012078.1-201ENST00000405035 1646 ntBASIC4.94□□□□□ -1.62
RTP4Q96DX8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTP4Q96DX8 AL121950.1-201ENST00000624993 2077 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RTP4Q96DX8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTP4Q96DX8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTP4Q96DX8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTP4Q96DX8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTP4Q96DX8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 COX6B1P1-201ENST00000415962 213 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 GLUD1P9-201ENST00000420997 1173 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RTP4Q96DX8 RPS26P2-201ENST00000440331 348 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 TDGF1P1-201ENST00000445734 527 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 EXOSC3P1-201ENST00000448649 500 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RTP4Q96DX8 RPS4XP12-201ENST00000461747 709 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 MTCO2P6-201ENST00000463134 685 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 RPL7P16-201ENST00000479738 738 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RTP4Q96DX8 AK4P6-201ENST00000505168 528 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 AC026782.2-201ENST00000510845 636 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 RNU6-319P-201ENST00000516025 108 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 MORF4L1P3-201ENST00000525966 950 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP4Q96DX8 AC004923.2-201ENST00000529649 369 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 DUXAP5-201ENST00000529668 529 ntBASIC4.93□□□□□ -1.62
RTP4Q96DX8 AC118942.1-201ENST00000529674 1035 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms