Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC096571.1-202ENST00000506634 735 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 RNU6-276P-201ENST00000516114 96 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 BRD9P1-201ENST00000529855 560 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 MTND1P24-201ENST00000552175 861 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AL158211.1-201ENST00000566763 763 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 FAM25E-202ENST00000608562 189 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 FRG1HP-204ENST00000617940 757 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 VN2R3P-201ENST00000422626 1412 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 RBPJP2-201ENST00000618187 1444 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 SMG1P7-201ENST00000565246 2704 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 SNORA48.4-201ENST00000391089 134 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 RNU6-932P-201ENST00000391108 106 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC104837.2-201ENST00000427236 424 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 USP12PY-201ENST00000427677 1064 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 RPL19P16-201ENST00000433839 588 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC006466.1-201ENST00000438721 289 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 HSFY3P-201ENST00000444242 1191 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 KNOP1P3-201ENST00000446933 426 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 RPS3AP53-201ENST00000454716 778 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 RPL7P48-201ENST00000461513 746 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 RPS27AP16-201ENST00000492222 470 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 OR7E128P-201ENST00000532736 1024 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AL358913.1-201ENST00000554342 121 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 MIR548Y-201ENST00000582739 110 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC011487.3-201ENST00000593607 453 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 VN1R87P-201ENST00000596706 487 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 RPP40P2-201ENST00000603596 712 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC008147.4-201ENST00000617570 1204 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.72□□□□□ -1.65
BEST3Q8N1M1 GTF2H2B-203ENST00000508065 1432 ntBASIC4.72□□□□□ -1.65
BEST3Q8N1M1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
BEST3Q8N1M1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.71□□□□□ -1.65
BEST3Q8N1M1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
BEST3Q8N1M1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 CASC19-221ENST00000641309 1382 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 RN7SKP74-201ENST00000362849 309 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 RN7SKP95-201ENST00000362860 303 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 RNA5SP428-201ENST00000365129 132 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms