Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 LINC00557-201ENST00000563184 1279 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 MTND2P13-201ENST00000577438 1039 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 MIR3667-201ENST00000581025 74 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AC019080.5-201ENST00000624891 757 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 AC006453.5-201ENST00000636451 619 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 SDAD1P1-202ENST00000524156 2051 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 SAMMSON-226ENST00000642089 1582 ntBASIC4.48□□□□□ -1.69
CCDC71Q8IV32 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC71Q8IV32 DDX6P1-205ENST00000441966 1436 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC015813.6-201ENST00000624409 5808 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 IL6STP1-201ENST00000346911 1020 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 FABP12P1-201ENST00000401911 322 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AL021331.1-201ENST00000402817 582 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 UBE2V1P15-201ENST00000407776 448 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC073136.2-201ENST00000417282 849 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC007563.3-201ENST00000433233 371 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 PTMAP3-201ENST00000447474 330 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC073264.2-201ENST00000448886 166 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 TCEA1P1-201ENST00000449716 880 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC093267.1-201ENST00000489176 961 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC093720.1-201ENST00000505681 714 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC016550.3-201ENST00000515706 767 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 MORF4L1P3-201ENST00000525966 950 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AP006289.1-201ENST00000538089 277 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 DYNLL1P4-201ENST00000549314 266 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC091042.1-201ENST00000579213 173 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC012557.1-201ENST00000607115 611 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC079298.2-201ENST00000623885 459 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 MIR7641-1-201ENST00000627518 61 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 DDX18P4-201ENST00000511690 1966 ntBASIC4.47□□□□□ -1.69
CCDC71Q8IV32 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC71Q8IV32 VN2R3P-201ENST00000422626 1412 ntBASIC4.46□□□□□ -1.69
CCDC71Q8IV32 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.46□□□□□ -1.69
CCDC71Q8IV32 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC71Q8IV32 DDX18P3-201ENST00000404856 2007 ntBASIC4.46□□□□□ -1.69
CCDC71Q8IV32 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CCDC71Q8IV32 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC71Q8IV32 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 OR10J6P-201ENST00000289731 930 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 RNU1-32P-201ENST00000363937 159 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 MIR195-201ENST00000385194 87 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CCDC71Q8IV32 RPS24P12-201ENST00000402084 394 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 RPS4XP9-201ENST00000405151 780 ntBASIC4.46□□□□□ -1.7
CCDC71Q8IV32 AC004074.1-201ENST00000421810 1063 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms