Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RPL5P22-201ENST00000480199 884 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC083982.1-201ENST00000485679 344 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 CEACAMP10-202ENST00000495431 496 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC093890.1-201ENST00000502554 540 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 HMGB1P44-201ENST00000508597 572 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 IMPA1P1-201ENST00000510718 842 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 PCNPP1-201ENST00000552501 511 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 OR4U1P-201ENST00000554958 912 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC127381.1-201ENST00000555979 939 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 DPRXP4-201ENST00000578053 568 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC008088.1-201ENST00000580993 280 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 MTND3P19-201ENST00000603825 345 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 Z94722.1-201ENST00000604328 474 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AL121895.2-201ENST00000619558 447 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC091953.3-201ENST00000623220 236 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 U6.107-201ENST00000637108 79 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 OR55B1P-203ENST00000641518 2602 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 AC003973.3-201ENST00000624863 2822 ntBASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SLC44A4Q53GD3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 PROS2P-201ENST00000474651 1951 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC111188.2-201ENST00000529697 1387 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 ENSAP3-201ENST00000312710 333 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 SNORA17.1-201ENST00000362945 126 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC211486.3-201ENST00000412694 621 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 TCEA1P4-201ENST00000415066 844 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 OR6C64P-201ENST00000419708 825 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 GSTM5P1-201ENST00000434751 660 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC073648.4-201ENST00000442655 781 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AL596266.1-201ENST00000448132 400 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC006463.2-201ENST00000473326 348 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 RPS7P6-201ENST00000485777 579 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 RPSAP51-201ENST00000497462 645 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 RN7SKP147-201ENST00000517154 244 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 HMGB1P1-201ENST00000522557 636 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC092490.3-201ENST00000545370 572 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 GSTP1P1-201ENST00000548078 319 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC009097.3-201ENST00000563557 1018 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 CYP2C60P-201ENST00000566088 139 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AL513327.3-201ENST00000602618 469 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 NANOGP3-201ENST00000605855 286 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC107952.2-201ENST00000606048 486 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AL451049.1-201ENST00000608672 497 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 AC010975.3-201ENST00000618727 978 ntBASIC5.6□□□□□ -1.51
SLC44A4Q53GD3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms