Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RFX4Q33E94 AL442639.1-201ENST00000625030 1899 ntBASIC4.22□□□□□ -1.73
RFX4Q33E94 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RFX4Q33E94 CIR1P2-201ENST00000514821 1342 ntBASIC4.21□□□□□ -1.73
RFX4Q33E94 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFX4Q33E94 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFX4Q33E94 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RFX4Q33E94 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RFX4Q33E94 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFX4Q33E94 RNA5SP305-201ENST00000362665 119 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 RNU1-63P-201ENST00000383902 164 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 MIR513A2-201ENST00000385249 127 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AC240504.1-201ENST00000395709 845 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 NCSTNP1-201ENST00000406229 144 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 RN7SKP213-201ENST00000410746 298 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AL591848.1-201ENST00000413092 322 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.21□□□□□ -1.74
RFX4Q33E94 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.21□□□□□ -1.74
RFX4Q33E94 RCC2P2-201ENST00000422174 918 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 CDY14P-201ENST00000431260 1014 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 PRELID3BP10-201ENST00000431957 584 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 CDY12P-201ENST00000440679 1015 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 CDY13P-201ENST00000445813 1015 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AC099063.2-201ENST00000446360 662 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AL035551.1-201ENST00000446931 348 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 CDY23P-201ENST00000451661 1014 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AL356390.1-201ENST00000455684 397 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 RPSAP50-201ENST00000481955 852 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.21□□□□□ -1.74
RFX4Q33E94 AC147055.3-201ENST00000510547 851 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 HNRNPKP5-201ENST00000515300 253 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.21□□□□□ -1.74
RFX4Q33E94 NPM1P6-201ENST00000521088 871 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.21□□□□□ -1.74
RFX4Q33E94 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.21□□□□□ -1.74
RFX4Q33E94 PDCD5P1-201ENST00000543528 309 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RFX4Q33E94 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.21□□□□□ -1.74
RFX4Q33E94 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.21□□□□□ -1.74
RFX4Q33E94 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.21□□□□□ -1.74
RFX4Q33E94 AC011487.3-201ENST00000593607 453 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AL391358.1-201ENST00000605342 190 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AC020634.1-201ENST00000608701 549 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AC103858.2-201ENST00000621471 543 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 AC091905.4-201ENST00000623432 202 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 SAMMSON-226ENST00000642089 1582 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RFX4Q33E94 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
RFX4Q33E94 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RFX4Q33E94 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFX4Q33E94 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFX4Q33E94 AC090971.4-201ENST00000560291 1800 ntBASIC4.21□□□□□ -1.74
RFX4Q33E94 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RFX4Q33E94 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFX4Q33E94 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.2□□□□□ -1.74
RFX4Q33E94 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RFX4Q33E94 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.2□□□□□ -1.74
RFX4Q33E94 NXPH1-205ENST00000602349 1953 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RFX4Q33E94 RNA5SP307-201ENST00000362863 116 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 RNA5SP507-201ENST00000363603 121 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 AC019155.1-201ENST00000382242 574 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 Z98745.1-201ENST00000402553 494 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.2□□□□□ -1.74
RFX4Q33E94 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFX4Q33E94 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
RFX4Q33E94 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.2□□□□□ -1.74
RFX4Q33E94 RNU4-34P-201ENST00000410431 124 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.2□□□□□ -1.74
RFX4Q33E94 RAB9AP4-201ENST00000415230 609 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 RPS23P10-201ENST00000416185 486 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.2□□□□□ -1.74
RFX4Q33E94 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.2□□□□□ -1.74
RFX4Q33E94 ELOCP18-201ENST00000434209 337 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.2□□□□□ -1.74
RFX4Q33E94 AC010733.1-201ENST00000451515 401 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 DDX39BP2-208ENST00000453923 258 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 OR2AF1P-201ENST00000454899 889 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.2□□□□□ -1.74
RFX4Q33E94 CCDC75P1-201ENST00000469247 791 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 MTND3P6-201ENST00000485242 339 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 IGLV2-34-201ENST00000490007 283 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.2□□□□□ -1.74
RFX4Q33E94 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.2□□□□□ -1.74
RFX4Q33E94 AC093763.2-201ENST00000505334 1223 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 VWA8P1-201ENST00000510889 176 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 SCARNA21.2-201ENST00000516600 166 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 MTCYBP19-201ENST00000517463 1124 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.2□□□□□ -1.74
RFX4Q33E94 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.2□□□□□ -1.74
RFX4Q33E94 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.2□□□□□ -1.74
RFX4Q33E94 AC008033.2-201ENST00000542626 177 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 EIF1AXP2-201ENST00000555940 413 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.2□□□□□ -1.74
RFX4Q33E94 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.2□□□□□ -1.74
RFX4Q33E94 AC103792.1-201ENST00000603591 919 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.2□□□□□ -1.74
RFX4Q33E94 AC004241.3-201ENST00000611728 517 ntBASIC4.2□□□□□ -1.74
RFX4Q33E94 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms