Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AL358178.1-201ENST00000407698 397 ntBASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 MIR3160-1-201ENST00000577972 85 ntBASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AC004241.3-201ENST00000611728 517 ntBASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 AC090017.1-201ENST00000548612 1779 ntBASIC5.32□□□□□ -1.56
SHROOM1Q2M3G4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 RNU6-697P-201ENST00000363348 107 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 RNA5SP28-201ENST00000363841 119 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 NRBF2P2-201ENST00000413087 861 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 AL450263.2-201ENST00000439400 589 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 NUTF2P3-201ENST00000448540 384 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 DHFRP3-201ENST00000455595 559 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 RPS4XP12-201ENST00000461747 709 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 NPM1P6-201ENST00000521088 871 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 AC025857.1-201ENST00000525252 377 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 OR8X1P-201ENST00000534542 869 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 TOMM20P2-201ENST00000540082 421 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 AC015912.2-201ENST00000571053 181 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 AL672167.1-203ENST00000641299 2975 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 AL451142.2-201ENST00000429076 2090 ntBASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM1Q2M3G4 SALL4P2-201ENST00000423288 2910 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 Y_RNA.62-201ENST00000362840 99 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AL136131.1-201ENST00000406079 803 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 VDAC1P6-201ENST00000430062 855 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 TMX2P1-201ENST00000436507 708 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AL606490.8-201ENST00000441624 319 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 RN7SL98P-201ENST00000462271 300 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 RN7SL303P-201ENST00000469773 251 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC008676.3-201ENST00000521237 435 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AP000827.1-201ENST00000527814 258 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 OR8A2P-201ENST00000528631 952 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC084824.1-201ENST00000550917 1005 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC008833.1-201ENST00000611633 691 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 MIR6891-201ENST00000618788 93 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms