Protein–RNA interactions for Protein: Q16656

NRF1, Nuclear respiratory factor 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1Q16656 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.32□□□□□ -1.72
NRF1Q16656 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NRF1Q16656 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.32□□□□□ -1.72
NRF1Q16656 FAR2P4-202ENST00000425399 584 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NRF1Q16656 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.32□□□□□ -1.72
NRF1Q16656 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.32□□□□□ -1.72
NRF1Q16656 AC010733.1-201ENST00000451515 401 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.32□□□□□ -1.72
NRF1Q16656 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.32□□□□□ -1.72
NRF1Q16656 HMGB3P14-201ENST00000494195 599 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 SCARNA22-201ENST00000503991 125 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NRF1Q16656 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.32□□□□□ -1.72
NRF1Q16656 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.32□□□□□ -1.72
NRF1Q16656 AC022784.5-201ENST00000522241 437 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 IFITM8P-201ENST00000522529 394 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 AC018442.3-201ENST00000523025 183 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 AC137768.1-201ENST00000549998 553 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.32□□□□□ -1.72
NRF1Q16656 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.32□□□□□ -1.72
NRF1Q16656 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.32□□□□□ -1.72
NRF1Q16656 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.32□□□□□ -1.72
NRF1Q16656 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.32□□□□□ -1.72
NRF1Q16656 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.32□□□□□ -1.72
NRF1Q16656 AL031320.1-201ENST00000604177 357 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 FAM27B-201ENST00000610601 213 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 AL161616.1-201ENST00000611867 286 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NRF1Q16656 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.32□□□□□ -1.72
NRF1Q16656 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
NRF1Q16656 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NRF1Q16656 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.32□□□□□ -1.72
NRF1Q16656 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NRF1Q16656 AL442639.1-201ENST00000625030 1899 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.32□□□□□ -1.72
NRF1Q16656 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
NRF1Q16656 AL133243.3-201ENST00000617415 3004 ntBASIC4.32□□□□□ -1.72
NRF1Q16656 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NRF1Q16656 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NRF1Q16656 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
NRF1Q16656 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.31□□□□□ -1.72
NRF1Q16656 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
NRF1Q16656 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 RNU6-697P-201ENST00000363348 107 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 OR13C3-201ENST00000374781 1108 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NRF1Q16656 VDAC2P1-201ENST00000399358 958 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 AL807761.1-201ENST00000417622 171 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 RCC2P2-201ENST00000422174 918 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
NRF1Q16656 AC073335.1-201ENST00000427776 363 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 AC008072.1-201ENST00000434254 824 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 AL353748.1-201ENST00000440753 474 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.31□□□□□ -1.72
NRF1Q16656 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.31□□□□□ -1.72
NRF1Q16656 AC090142.1-201ENST00000465776 462 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 RN7SL738P-201ENST00000470264 297 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 RN7SL860P-201ENST00000473738 223 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 MTND3P6-201ENST00000485242 339 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.31□□□□□ -1.72
NRF1Q16656 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.31□□□□□ -1.72
NRF1Q16656 AC015795.1-201ENST00000513669 327 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.31□□□□□ -1.72
NRF1Q16656 RNU6-551P-201ENST00000516661 103 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.31□□□□□ -1.72
NRF1Q16656 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.31□□□□□ -1.72
NRF1Q16656 MIR3667-201ENST00000581025 74 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.31□□□□□ -1.72
NRF1Q16656 AC073137.1-201ENST00000605636 634 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 AC091905.2-201ENST00000623143 306 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NRF1Q16656 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 OR14L1P-202ENST00000641545 3009 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 SAMMSON-226ENST00000642089 1582 ntBASIC4.31□□□□□ -1.72
NRF1Q16656 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NRF1Q16656 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NRF1Q16656 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.3□□□□□ -1.72
NRF1Q16656 TTC39DP-201ENST00000416781 1688 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NRF1Q16656 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NRF1Q16656 RNU1-44P-201ENST00000384453 163 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 CYB5AP4-201ENST00000396692 399 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.3□□□□□ -1.72
NRF1Q16656 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.3□□□□□ -1.72
NRF1Q16656 CYCSP11-201ENST00000436426 315 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.3□□□□□ -1.72
NRF1Q16656 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.3□□□□□ -1.72
NRF1Q16656 AL356390.1-201ENST00000455684 397 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms