Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 SLC25A36P1-201ENST00000590111 465 ntBASIC3.96□□□□□ -1.78
FOXF1Q12946 AC005034.4-201ENST00000603612 899 ntBASIC3.96□□□□□ -1.78
FOXF1Q12946 AC005191.1-201ENST00000603950 358 ntBASIC3.96□□□□□ -1.78
FOXF1Q12946 AC113403.1-201ENST00000604910 193 ntBASIC3.96□□□□□ -1.78
FOXF1Q12946 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXF1Q12946 AC026979.4-201ENST00000606555 645 ntBASIC3.96□□□□□ -1.78
FOXF1Q12946 AL138721.1-201ENST00000616756 179 ntBASIC3.96□□□□□ -1.78
FOXF1Q12946 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.96□□□□□ -1.78
FOXF1Q12946 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXF1Q12946 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF1Q12946 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXF1Q12946 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXF1Q12946 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF1Q12946 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF1Q12946 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF1Q12946 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
FOXF1Q12946 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXF1Q12946 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXF1Q12946 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXF1Q12946 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
FOXF1Q12946 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.95□□□□□ -1.78
FOXF1Q12946 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXF1Q12946 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXF1Q12946 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXF1Q12946 RNU4-39P-201ENST00000362455 127 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 RNU1-32P-201ENST00000363937 159 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
FOXF1Q12946 BMS1P3-201ENST00000372011 932 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 RNA5SP372-201ENST00000390836 115 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 U3.22-201ENST00000391120 215 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AL583835.1-201ENST00000399570 407 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AL807761.1-201ENST00000417622 171 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 OR2X1P-201ENST00000421144 687 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXF1Q12946 RPL23AP52-201ENST00000439311 478 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXF1Q12946 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.95□□□□□ -1.78
FOXF1Q12946 RN7SL810P-201ENST00000493031 276 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXF1Q12946 AC010476.1-201ENST00000519111 851 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 RAB9BP1-201ENST00000519581 626 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AP000859.1-201ENST00000525536 307 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.95□□□□□ -1.78
FOXF1Q12946 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.95□□□□□ -1.78
FOXF1Q12946 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.95□□□□□ -1.78
FOXF1Q12946 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXF1Q12946 MIR4277-201ENST00000578298 84 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AC008759.1-201ENST00000589783 983 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 RPL26P30-202ENST00000602923 645 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AL356218.2-201ENST00000605264 187 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 MIR6748-201ENST00000610433 71 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.95□□□□□ -1.78
FOXF1Q12946 AL158196.1-201ENST00000616786 434 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 uc_338.13-201ENST00000618243 179 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AL035461.2-201ENST00000619201 524 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 AC140479.6-201ENST00000633535 357 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 FP325313.1-201ENST00000638228 703 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
FOXF1Q12946 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
FOXF1Q12946 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
FOXF1Q12946 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXF1Q12946 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXF1Q12946 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXF1Q12946 MTCO1P15-201ENST00000529569 1526 ntBASIC3.95□□□□□ -1.78
FOXF1Q12946 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXF1Q12946 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXF1Q12946 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXF1Q12946 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXF1Q12946 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
FOXF1Q12946 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXF1Q12946 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXF1Q12946 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXF1Q12946 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXF1Q12946 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC091046.3-201ENST00000631455 1574 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
FOXF1Q12946 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
FOXF1Q12946 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXF1Q12946 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 RPS3AP54-201ENST00000435535 734 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 CBX1P1-201ENST00000440184 427 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 AC011276.1-201ENST00000469688 323 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 AC025674.1-201ENST00000507074 324 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC021733.2-201ENST00000518830 497 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC009643.1-201ENST00000532030 391 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms