Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 AC007599.1-201ENST00000568688 1174 ntBASIC2.94□□□□□ -1.94
RPL39P62891 AC091042.1-201ENST00000579213 173 ntBASIC2.94□□□□□ -1.94
RPL39P62891 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC2.94□□□□□ -1.94
RPL39P62891 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.94□□□□□ -1.94
RPL39P62891 AP000255.1-201ENST00000610276 676 ntBASIC2.94□□□□□ -1.94
RPL39P62891 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
RPL39P62891 AC022467.1-201ENST00000614738 749 ntBASIC2.94□□□□□ -1.94
RPL39P62891 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
RPL39P62891 CCL14-204ENST00000622526 472 ntTSL 3 BASIC2.94□□□□□ -1.94
RPL39P62891 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC2.94□□□□□ -1.94
RPL39P62891 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 AL773545.4-201ENST00000637262 310 ntBASIC2.94□□□□□ -1.94
RPL39P62891 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RPL39P62891 AL513478.4-201ENST00000641636 310 ntBASIC2.94□□□□□ -1.94
RPL39P62891 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC2.94□□□□□ -1.94
RPL39P62891 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.94□□□□□ -1.94
RPL39P62891 DDX18P6-201ENST00000450119 1997 ntBASIC2.94□□□□□ -1.94
RPL39P62891 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RPL39P62891 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
RPL39P62891 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.93□□□□□ -1.94
RPL39P62891 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 SDAD1P1-202ENST00000524156 2051 ntBASIC2.93□□□□□ -1.94
RPL39P62891 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RPL39P62891 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RPL39P62891 RNA5SP507-201ENST00000363603 121 ntBASIC2.93□□□□□ -1.94
RPL39P62891 RNA5SP322-201ENST00000363617 119 ntBASIC2.93□□□□□ -1.94
RPL39P62891 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 RNA5SP397-201ENST00000391323 118 ntBASIC2.93□□□□□ -1.94
RPL39P62891 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC2.93□□□□□ -1.94
RPL39P62891 PGBD4P8-201ENST00000412993 562 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.93□□□□□ -1.94
RPL39P62891 AC079355.1-201ENST00000421770 223 ntBASIC2.93□□□□□ -1.94
RPL39P62891 RPS12P5-201ENST00000423449 371 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.93□□□□□ -1.94
RPL39P62891 YWHAQP9-201ENST00000445891 512 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC2.93□□□□□ -1.94
RPL39P62891 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC2.93□□□□□ -1.94
RPL39P62891 EIF4A2P2-201ENST00000455776 1070 ntBASIC2.93□□□□□ -1.94
RPL39P62891 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 RPL12P20-201ENST00000475538 479 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC2.93□□□□□ -1.94
RPL39P62891 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.93□□□□□ -1.94
RPL39P62891 AC010342.1-201ENST00000514047 877 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC2.93□□□□□ -1.94
RPL39P62891 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC2.93□□□□□ -1.94
RPL39P62891 RNA5SP34-201ENST00000516887 130 ntBASIC2.93□□□□□ -1.94
RPL39P62891 RNA5SP143-201ENST00000516936 115 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AC090281.1-201ENST00000523019 276 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC2.93□□□□□ -1.94
RPL39P62891 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC2.93□□□□□ -1.94
RPL39P62891 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC2.93□□□□□ -1.94
RPL39P62891 AC021483.2-201ENST00000567415 758 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC2.93□□□□□ -1.94
RPL39P62891 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC2.93□□□□□ -1.94
RPL39P62891 AC104662.1-201ENST00000604448 511 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AP003392.5-201ENST00000607857 415 ntBASIC2.93□□□□□ -1.94
RPL39P62891 MIR6768-201ENST00000610734 72 ntBASIC2.93□□□□□ -1.94
RPL39P62891 MIR486-1-201ENST00000612171 68 ntBASIC2.93□□□□□ -1.94
RPL39P62891 NAA60-237ENST00000615865 326 ntTSL 5 BASIC2.93□□□□□ -1.94
RPL39P62891 AC067931.1-201ENST00000624190 671 ntBASIC2.93□□□□□ -1.94
RPL39P62891 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC2.93□□□□□ -1.94
RPL39P62891 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC2.93□□□□□ -1.94
RPL39P62891 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RPL39P62891 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.93□□□□□ -1.94
RPL39P62891 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 FAM35DP-201ENST00000323387 2712 ntBASIC2.93□□□□□ -1.94
RPL39P62891 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RPL39P62891 AC092162.3-201ENST00000624511 1624 ntBASIC2.93□□□□□ -1.94
RPL39P62891 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 BDP1P-201ENST00000582658 1990 ntBASIC2.92□□□□□ -1.94
RPL39P62891 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.92□□□□□ -1.94
RPL39P62891 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RPL39P62891 MIR331-201ENST00000362302 94 ntBASIC2.92□□□□□ -1.94
RPL39P62891 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 MIR298-201ENST00000401212 88 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC2.92□□□□□ -1.94
RPL39P62891 FAR2P2-201ENST00000413041 594 ntBASIC2.92□□□□□ -1.94
RPL39P62891 RAC1P3-201ENST00000416129 580 ntBASIC2.92□□□□□ -1.94
RPL39P62891 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC2.92□□□□□ -1.94
RPL39P62891 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC2.92□□□□□ -1.94
RPL39P62891 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.92□□□□□ -1.94
RPL39P62891 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms