Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC026348.1-201ENST00000462549 1053 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.08□□□□□ -1.6
NR1H2P55055 RN7SL466P-201ENST00000497546 295 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NR1H2P55055 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NR1H2P55055 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NR1H2P55055 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NR1H2P55055 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.08□□□□□ -1.6
NR1H2P55055 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NR1H2P55055 OR4A2P-201ENST00000527276 913 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.08□□□□□ -1.6
NR1H2P55055 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.08□□□□□ -1.6
NR1H2P55055 MIR4512-201ENST00000583257 77 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.08□□□□□ -1.6
NR1H2P55055 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.08□□□□□ -1.6
NR1H2P55055 OR7E18P-201ENST00000592589 702 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.08□□□□□ -1.6
NR1H2P55055 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.08□□□□□ -1.6
NR1H2P55055 FO393422.1-201ENST00000603908 708 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 AC069431.2-201ENST00000604149 1099 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.08□□□□□ -1.6
NR1H2P55055 AC090948.2-201ENST00000607363 564 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 AC013468.1-201ENST00000608680 598 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.08□□□□□ -1.6
NR1H2P55055 AC015914.2-201ENST00000618167 288 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 BX005214.3-202ENST00000619809 325 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 AP003072.4-201ENST00000624580 310 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 AC139713.2-210ENST00000641741 992 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NR1H2P55055 AC007529.1-201ENST00000418574 2178 ntBASIC5.08□□□□□ -1.6
NR1H2P55055 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NR1H2P55055 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NR1H2P55055 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.08□□□□□ -1.6
NR1H2P55055 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NR1H2P55055 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.07□□□□□ -1.6
NR1H2P55055 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NR1H2P55055 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NR1H2P55055 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.07□□□□□ -1.6
NR1H2P55055 MAPK10-304ENST00000641341 3984 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NR1H2P55055 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.07□□□□□ -1.6
NR1H2P55055 AC013442.1-201ENST00000397347 228 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 HMGB1P20-201ENST00000402555 677 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.07□□□□□ -1.6
NR1H2P55055 BMS1P17-202ENST00000416720 316 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC106883.1-201ENST00000418805 562 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 GAPDHP49-201ENST00000421421 961 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 MTCO2P23-201ENST00000425216 680 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC127526.2-201ENST00000426436 775 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 AC005002.1-201ENST00000447458 540 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC104164.3-201ENST00000467363 1258 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC073522.1-201ENST00000483312 377 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 NIFKP7-201ENST00000503365 834 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 UBE2V1P12-201ENST00000503954 474 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 DUTP7-201ENST00000507982 486 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 RN7SKP46-201ENST00000515942 234 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 RNA5SP464-201ENST00000516251 108 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 IGKV2-18-201ENST00000522607 343 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC021451.1-201ENST00000523498 1129 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.07□□□□□ -1.6
NR1H2P55055 AC118942.1-201ENST00000529674 1035 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.07□□□□□ -1.6
NR1H2P55055 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.07□□□□□ -1.6
NR1H2P55055 AL442163.2-201ENST00000553912 710 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.07□□□□□ -1.6
NR1H2P55055 AL049872.1-201ENST00000556323 322 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.07□□□□□ -1.6
NR1H2P55055 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.07□□□□□ -1.6
NR1H2P55055 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.07□□□□□ -1.6
NR1H2P55055 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 Z82195.1-201ENST00000604558 398 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 AC104695.2-201ENST00000605056 775 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.07□□□□□ -1.6
NR1H2P55055 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NR1H2P55055 VN1R74P-201ENST00000613259 503 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NR1H2P55055 AP001002.2-201ENST00000625137 386 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.07□□□□□ -1.6
NR1H2P55055 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.07□□□□□ -1.6
NR1H2P55055 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.07□□□□□ -1.6
NR1H2P55055 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
NR1H2P55055 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NR1H2P55055 AL022322.2-201ENST00000624072 20397 ntBASIC5.07□□□□□ -1.6
NR1H2P55055 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NR1H2P55055 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.07□□□□□ -1.6
NR1H2P55055 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NR1H2P55055 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.07□□□□□ -1.6
NR1H2P55055 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NR1H2P55055 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NR1H2P55055 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms