Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SAP18P1-201ENST00000512058 390 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGCS2P54868 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HMGCS2P54868 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGCS2P54868 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS2P54868 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGCS2P54868 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS2P54868 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS2P54868 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGCS2P54868 AGGF1P6-201ENST00000569213 976 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 RN7SL600P-201ENST00000581811 299 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 AC090181.2-201ENST00000602975 672 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 AC099676.1-201ENST00000608886 657 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 MIR6867-201ENST00000610636 67 ntBASIC5.1□□□□□ -1.59
HMGCS2P54868 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HMGCS2P54868 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGCS2P54868 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
HMGCS2P54868 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS2P54868 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HMGCS2P54868 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HMGCS2P54868 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
HMGCS2P54868 AC011755.1-201ENST00000623763 2049 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HMGCS2P54868 AC008079.2-201ENST00000623543 20396 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS2P54868 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HMGCS2P54868 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS2P54868 RPS20P14-201ENST00000412545 360 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 AC009506.2-201ENST00000420635 840 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS2P54868 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGCS2P54868 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS2P54868 BMS1P19-201ENST00000433925 393 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 UBE2V1P3-201ENST00000439651 417 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 AC114495.1-201ENST00000441274 436 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 MRPL48P1-201ENST00000445390 636 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 AC006326.1-201ENST00000445465 787 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGCS2P54868 RPS27AP13-201ENST00000498403 237 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 ASNSP4-201ENST00000511103 447 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGCS2P54868 AC006130.2-201ENST00000586202 326 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 AL354984.3-201ENST00000604803 325 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS2P54868 AC015914.2-201ENST00000618167 288 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS2P54868 AC112484.5-201ENST00000624189 228 ntBASIC5.09□□□□□ -1.59
HMGCS2P54868 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HMGCS2P54868 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HMGCS2P54868 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGCS2P54868 NXPH1-205ENST00000602349 1953 ntBASIC5.09□□□□□ -1.6
HMGCS2P54868 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.09□□□□□ -1.6
HMGCS2P54868 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HMGCS2P54868 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
HMGCS2P54868 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HMGCS2P54868 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
HMGCS2P54868 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGCS2P54868 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGCS2P54868 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS2P54868 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMGCS2P54868 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS2P54868 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AL022322.2-201ENST00000624072 20397 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 CDC27P2-201ENST00000425026 1922 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS2P54868 OR56B2P-201ENST00000317102 954 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 RNU1-85P-201ENST00000364127 164 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS2P54868 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS2P54868 RPL6P29-201ENST00000414863 865 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AL356095.1-201ENST00000417217 199 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 AC234781.4-201ENST00000419384 244 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 AL117339.2-201ENST00000430475 180 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS2P54868 BTF3P10-201ENST00000433415 495 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 NMNAT1P2-201ENST00000435192 860 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS2P54868 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AL157385.1-201ENST00000446973 268 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AL132838.2-201ENST00000492041 314 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGCS2P54868 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.08□□□□□ -1.6
HMGCS2P54868 OR5BC1P-201ENST00000529327 739 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGCS2P54868 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGCS2P54868 AL161729.3-201ENST00000603533 673 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 AC025175.1-201ENST00000606482 759 ntBASIC5.08□□□□□ -1.6
HMGCS2P54868 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.08□□□□□ -1.6
HMGCS2P54868 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGCS2P54868 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGCS2P54868 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms