Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.08□□□□□ -1.44
EPHB3P54753 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
EPHB3P54753 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB3P54753 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.08□□□□□ -1.44
EPHB3P54753 GLYCAM1-201ENST00000546596 285 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB3P54753 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB3P54753 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB3P54753 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.08□□□□□ -1.44
EPHB3P54753 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB3P54753 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.08□□□□□ -1.44
EPHB3P54753 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.08□□□□□ -1.44
EPHB3P54753 AL121757.2-201ENST00000611223 313 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB3P54753 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB3P54753 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
EPHB3P54753 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB3P54753 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB3P54753 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.08□□□□□ -1.44
EPHB3P54753 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.08□□□□□ -1.44
EPHB3P54753 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
EPHB3P54753 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB3P54753 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB3P54753 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
EPHB3P54753 TTC39DP-201ENST00000416781 1688 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB3P54753 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB3P54753 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB3P54753 IL6STP1-201ENST00000346911 1020 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AL159987.1-201ENST00000347911 293 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
EPHB3P54753 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
EPHB3P54753 RNU6-1251P-201ENST00000364502 107 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB3P54753 DNAJC19P6-201ENST00000401853 280 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AL079342.2-201ENST00000403367 482 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AL109913.1-201ENST00000421173 514 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC113412.1-201ENST00000425840 504 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 USP12PX-201ENST00000432383 1057 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 MTCO3P18-201ENST00000440206 761 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 MTND3P10-201ENST00000450967 341 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 RPS26P39-201ENST00000469206 341 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC116337.2-201ENST00000477662 156 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 RN7SL570P-201ENST00000484405 292 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC079382.1-201ENST00000493346 557 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 DUTP7-201ENST00000507982 486 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC098799.2-201ENST00000509466 868 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC139365.2-201ENST00000517972 253 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 IGKV2-18-201ENST00000522607 343 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 MRPS16P1-201ENST00000523462 412 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC012435.1-202ENST00000568772 240 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 MIR1273E-201ENST00000581165 102 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.07□□□□□ -1.44
EPHB3P54753 EIF1P6-201ENST00000600054 334 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 C8orf59P2-201ENST00000603441 271 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 IMMP1LP1-201ENST00000605170 488 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC092354.1-201ENST00000606057 376 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 AL159169.3-201ENST00000608871 561 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC090970.3-201ENST00000612566 866 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC135068.5-201ENST00000624197 983 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 PCMTD1P7-201ENST00000634506 357 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC073869.7-201ENST00000640874 297 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
EPHB3P54753 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 Z83820.1-201ENST00000456978 1499 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB3P54753 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB3P54753 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
EPHB3P54753 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB3P54753 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.07□□□□□ -1.44
EPHB3P54753 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms