Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RPL10P14-201ENST00000565265 298 ntBASIC5.5□□□□□ -1.53
COPAP53621 CYP2C60P-201ENST00000566088 139 ntBASIC5.5□□□□□ -1.53
COPAP53621 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.5□□□□□ -1.53
COPAP53621 MIR3691-201ENST00000578066 90 ntBASIC5.5□□□□□ -1.53
COPAP53621 AP005403.1-201ENST00000579720 229 ntBASIC5.5□□□□□ -1.53
COPAP53621 NIFKP6-201ENST00000598115 845 ntBASIC5.5□□□□□ -1.53
COPAP53621 AC018809.2-201ENST00000602436 3823 ntBASIC5.5□□□□□ -1.53
COPAP53621 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.5□□□□□ -1.53
COPAP53621 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
COPAP53621 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.5□□□□□ -1.53
COPAP53621 AC006386.1-201ENST00000619436 415 ntBASIC5.5□□□□□ -1.53
COPAP53621 AC024595.1-201ENST00000623088 387 ntBASIC5.5□□□□□ -1.53
COPAP53621 AC068057.2-201ENST00000624047 895 ntBASIC5.5□□□□□ -1.53
COPAP53621 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.5□□□□□ -1.53
COPAP53621 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.5□□□□□ -1.53
COPAP53621 FRG1EP-201ENST00000634469 770 ntBASIC5.5□□□□□ -1.53
COPAP53621 LINC01808-202ENST00000641680 1116 ntBASIC5.5□□□□□ -1.53
COPAP53621 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.5□□□□□ -1.53
COPAP53621 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.5□□□□□ -1.53
COPAP53621 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.5□□□□□ -1.53
COPAP53621 DDX18P3-201ENST00000404856 2007 ntBASIC5.5□□□□□ -1.53
COPAP53621 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COPAP53621 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COPAP53621 AC090017.1-201ENST00000548612 1779 ntBASIC5.5□□□□□ -1.53
COPAP53621 AC099786.3-201ENST00000565735 1410 ntBASIC5.49□□□□□ -1.53
COPAP53621 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 AC007996.1-201ENST00000620414 2821 ntBASIC5.49□□□□□ -1.53
COPAP53621 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 AC090971.4-201ENST00000560291 1800 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC009313.2-201ENST00000417893 1941 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC009229.4-201ENST00000623854 1947 ntBASIC5.49□□□□□ -1.53
COPAP53621 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPAP53621 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COPAP53621 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.49□□□□□ -1.53
COPAP53621 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPAP53621 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COPAP53621 RNU1-106P-201ENST00000384382 164 ntBASIC5.49□□□□□ -1.53
COPAP53621 OR4K12P-201ENST00000406538 961 ntBASIC5.49□□□□□ -1.53
COPAP53621 RN7SKP247-201ENST00000411094 308 ntBASIC5.49□□□□□ -1.53
COPAP53621 BTF3P8-201ENST00000414577 526 ntBASIC5.49□□□□□ -1.53
COPAP53621 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.49□□□□□ -1.53
COPAP53621 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.49□□□□□ -1.53
COPAP53621 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 RPS27P18-201ENST00000431701 247 ntBASIC5.49□□□□□ -1.53
COPAP53621 GSTM5P1-201ENST00000434751 660 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 PTGES3P1-201ENST00000439531 483 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC073465.2-201ENST00000440938 498 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 MTCYBP11-201ENST00000447254 1109 ntBASIC5.49□□□□□ -1.53
COPAP53621 AL672138.1-201ENST00000450604 1015 ntBASIC5.49□□□□□ -1.53
COPAP53621 EIF4A1P11-201ENST00000451239 222 ntBASIC5.49□□□□□ -1.53
COPAP53621 AL389915.2-201ENST00000454576 441 ntBASIC5.49□□□□□ -1.53
COPAP53621 BX284632.1-201ENST00000478218 541 ntBASIC5.49□□□□□ -1.53
COPAP53621 RPL7P6-201ENST00000480903 738 ntBASIC5.49□□□□□ -1.53
COPAP53621 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.49□□□□□ -1.53
COPAP53621 AC093534.1-201ENST00000504977 132 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.49□□□□□ -1.53
COPAP53621 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.49□□□□□ -1.53
COPAP53621 AC104108.1-201ENST00000509930 412 ntBASIC5.49□□□□□ -1.53
COPAP53621 SCARNA16.4-201ENST00000516956 187 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.49□□□□□ -1.53
COPAP53621 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.49□□□□□ -1.53
COPAP53621 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.49□□□□□ -1.53
COPAP53621 RN7SL708P-201ENST00000580952 299 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC069307.1-201ENST00000602820 447 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 AC025811.1-201ENST00000604312 472 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC002487.1-201ENST00000604565 994 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC024940.4-201ENST00000605507 246 ntBASIC5.49□□□□□ -1.53
COPAP53621 AC024060.1-201ENST00000607052 494 ntBASIC5.49□□□□□ -1.53
COPAP53621 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 STMN1P1-201ENST00000617809 440 ntBASIC5.49□□□□□ -1.53
COPAP53621 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPAP53621 Z99129.2-201ENST00000619967 314 ntBASIC5.49□□□□□ -1.53
COPAP53621 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.49□□□□□ -1.53
COPAP53621 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPAP53621 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
COPAP53621 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COPAP53621 AL451142.2-201ENST00000429076 2090 ntBASIC5.49□□□□□ -1.53
COPAP53621 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.49□□□□□ -1.53
COPAP53621 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COPAP53621 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
COPAP53621 AC073429.2-201ENST00000569694 1444 ntBASIC5.48□□□□□ -1.53
COPAP53621 MFSD8-220ENST00000641243 1422 ntBASIC5.48□□□□□ -1.53
COPAP53621 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COPAP53621 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COPAP53621 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
COPAP53621 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
COPAP53621 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.48□□□□□ -1.53
COPAP53621 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COPAP53621 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms