Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 U6.48-201ENST00000618523 106 ntBASIC5.47□□□□□ -1.53
COPB1P53618 AC022106.2-201ENST00000620114 757 ntBASIC5.47□□□□□ -1.53
COPB1P53618 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.47□□□□□ -1.53
COPB1P53618 AC004232.3-201ENST00000622977 525 ntBASIC5.47□□□□□ -1.53
COPB1P53618 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.47□□□□□ -1.53
COPB1P53618 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COPB1P53618 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.47□□□□□ -1.53
COPB1P53618 AC009643.2-201ENST00000603543 1448 ntBASIC5.47□□□□□ -1.53
COPB1P53618 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COPB1P53618 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COPB1P53618 AP001642.1-201ENST00000624727 2117 ntBASIC5.47□□□□□ -1.53
COPB1P53618 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
COPB1P53618 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.46□□□□□ -1.53
COPB1P53618 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COPB1P53618 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COPB1P53618 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COPB1P53618 MTND4P8-201ENST00000514997 1362 ntBASIC5.46□□□□□ -1.54
COPB1P53618 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
COPB1P53618 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
COPB1P53618 RNU4-28P-201ENST00000364739 141 ntBASIC5.46□□□□□ -1.54
COPB1P53618 RNU1-43P-201ENST00000365052 165 ntBASIC5.46□□□□□ -1.54
COPB1P53618 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COPB1P53618 SNORA70-201ENST00000384436 135 ntBASIC5.46□□□□□ -1.54
COPB1P53618 RNU6-906P-201ENST00000384700 70 ntBASIC5.46□□□□□ -1.54
COPB1P53618 ATF1P1-201ENST00000406040 927 ntBASIC5.46□□□□□ -1.54
COPB1P53618 MIR1271-201ENST00000408537 86 ntBASIC5.46□□□□□ -1.54
COPB1P53618 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.46□□□□□ -1.54
COPB1P53618 KRR1P1-201ENST00000419430 803 ntBASIC5.46□□□□□ -1.54
COPB1P53618 USP9YP21-201ENST00000420603 432 ntBASIC5.46□□□□□ -1.54
COPB1P53618 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.46□□□□□ -1.54
COPB1P53618 CKS1BP6-201ENST00000424932 240 ntBASIC5.46□□□□□ -1.54
COPB1P53618 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.46□□□□□ -1.54
COPB1P53618 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.46□□□□□ -1.54
COPB1P53618 AC093422.3-201ENST00000428506 305 ntBASIC5.46□□□□□ -1.54
COPB1P53618 AC000041.1-201ENST00000439655 175 ntBASIC5.46□□□□□ -1.54
COPB1P53618 VN1R25P-201ENST00000443385 738 ntBASIC5.46□□□□□ -1.54
COPB1P53618 TCEA1P1-201ENST00000449716 880 ntBASIC5.46□□□□□ -1.54
COPB1P53618 RHEBP2-201ENST00000450289 600 ntBASIC5.46□□□□□ -1.54
COPB1P53618 RNA5SP103-201ENST00000459503 118 ntBASIC5.46□□□□□ -1.54
COPB1P53618 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.46□□□□□ -1.54
COPB1P53618 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.46□□□□□ -1.54
COPB1P53618 MTND4LP2-201ENST00000502312 285 ntBASIC5.46□□□□□ -1.54
COPB1P53618 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.46□□□□□ -1.54
COPB1P53618 OR5M14P-201ENST00000506803 618 ntBASIC5.46□□□□□ -1.54
COPB1P53618 AC138938.1-201ENST00000515431 782 ntBASIC5.46□□□□□ -1.54
COPB1P53618 CYB5AP5-201ENST00000549779 389 ntBASIC5.46□□□□□ -1.54
COPB1P53618 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.46□□□□□ -1.54
COPB1P53618 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.46□□□□□ -1.54
COPB1P53618 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.46□□□□□ -1.54
COPB1P53618 AC113368.1-201ENST00000603736 382 ntBASIC5.46□□□□□ -1.54
COPB1P53618 AC073387.2-201ENST00000604797 784 ntBASIC5.46□□□□□ -1.54
COPB1P53618 RMST_10.1-201ENST00000616309 154 ntBASIC5.46□□□□□ -1.54
COPB1P53618 MIR8069-1-201ENST00000616627 86 ntBASIC5.46□□□□□ -1.54
COPB1P53618 MIR6837-201ENST00000620884 64 ntBASIC5.46□□□□□ -1.54
COPB1P53618 MIR8069-2-201ENST00000621412 86 ntBASIC5.46□□□□□ -1.54
COPB1P53618 AC104985.3-201ENST00000623479 597 ntBASIC5.46□□□□□ -1.54
COPB1P53618 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.46□□□□□ -1.54
COPB1P53618 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COPB1P53618 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COPB1P53618 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COPB1P53618 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.46□□□□□ -1.54
COPB1P53618 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.46□□□□□ -1.54
COPB1P53618 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COPB1P53618 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COPB1P53618 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
COPB1P53618 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
COPB1P53618 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 HSPD1P11-201ENST00000508643 1702 ntBASIC5.45□□□□□ -1.54
COPB1P53618 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COPB1P53618 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 AL359643.1-201ENST00000404109 423 ntBASIC5.45□□□□□ -1.54
COPB1P53618 DUTP5-201ENST00000406790 469 ntBASIC5.45□□□□□ -1.54
COPB1P53618 MIR1286-201ENST00000408112 78 ntBASIC5.45□□□□□ -1.54
COPB1P53618 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.45□□□□□ -1.54
COPB1P53618 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.45□□□□□ -1.54
COPB1P53618 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.45□□□□□ -1.54
COPB1P53618 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.45□□□□□ -1.54
COPB1P53618 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.45□□□□□ -1.54
COPB1P53618 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COPB1P53618 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.45□□□□□ -1.54
COPB1P53618 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.45□□□□□ -1.54
COPB1P53618 AL138787.1-202ENST00000437804 898 ntBASIC5.45□□□□□ -1.54
COPB1P53618 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms